Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4890g00003 ATGGCCAATAAAACTTCACCACCATCTCAAACCATAGATCCTTACCAGCACCTCAAAATCGTTCATAACCCCAACGATACACTCACTCGCTCGATTGATTTTCCATCTACCTTACCCTCATCAGACACCACTCTTCCTATCTCTGTTCTCACTAAGGATGTTACCATCAACCAATCAAACAACACCTGGCTTCGATTATTCCTACCCCGAAAAGCAATACCGGTTCATGGTTATTCTACTTCCAACCAAAACCACAAGCTACCTCTCATTGTTTACTTCCATGGAAGTGGCTTCATCATAACGAGTGCAGCTTCCACCATGTCCCATGATTTTTGTGTGAACATGGCAGAGAGCATAGAAGCCGTCGTTGCCTCGGTGGAATATCGCCTTGCGCCGGAGCATCGGTTGCCGGCGGCGTATGATGATGCGATGGAAACGTTGGTTTGGATTACAAGTAGCCAAGATGAGTGGTTGACACATTATGTTGACTATTCTAATTGTTATTTGATGGGGAGTAGTGCTGGGGCTACTATTGCCTACTATGCAGGTCTACGTGCAGCACAAGAGGTTGATCATCTTGAACCATTAAAGATCCAAGGGCTGATATTGCGCCAACCATTCTTCGGTGGGACCAAGAGAAGCGGGTCTGAGTTGAGGCATGAGAATGACCCAGTTCTTCCGTTGTGTGTTTCTGATTTGTTGTGGGAGTTAGCATTACCAATTGGGGTTGACCGTGAGCATGAGTATTGCAATCTAAGGGCTGAGAATTGTCTTGAGAAACTAGATAAGATCGAGGTGCTTGGTTGGAGGGTATTGGTGAGTGGTAATGGTGGGGACCCACTTGTTGACCGTGAGAAGGAGCTTGTGAAGTTGATGGAGGAAAAGGGTGTGCAAGTGGTTAGTGATTTTGAGGAAGAAGGTTGCCATGGAGTAGAGTTTTCTGATTCCTCTAAAGCAAAGCAACTCATTGAGATAGTGAAAGGTTTCATTTCCTCGTTTGGAGCTTAG 1008 0.4563 MANKTSPPSQTIDPYQHLKIVHNPNDTLTRSIDFPSTLPSSDTTLPISVLTKDVTINQSNNTWLRLFLPRKAIPVHGYSTSNQNHKLPLIVYFHGSGFIITSAASTMSHDFCVNMAESIEAVVASVEYRLAPEHRLPAAYDDAMETLVWITSSQDEWLTHYVDYSNCYLMGSSAGATIAYYAGLRAAQEVDHLEPLKIQGLILRQPFFGGTKRSGSELRHENDPVLPLCVSDLLWELALPIGVDREHEYCNLRAENCLEKLDKIEVLGWRVLVSGNGGDPLVDREKELVKLMEEKGVQVVSDFEEEGCHGVEFSDSSKAKQLIEIVKGFISSFGA 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4890g00003 335 PANTHER ARYLACETAMIDE DEACETYLASE 44 312 - -
Gabi4890g00003 335 Pfam alpha/beta hydrolase fold 90 311 IPR013094 GO:0016787
Gabi4890g00003 335 Gene3D alpha/beta hydrolase 15 333 IPR029058 -
Gabi4890g00003 335 SUPERFAMILY alpha/beta-Hydrolases 30 330 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4890g00003 Gabi-Chr4890 91051 96349 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4890g00003 32 299 Carbohydrate Esterase AT5G16080 36.462 8.98e-51 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4890g00003 - - gmx:100779813 448.358