Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi488g00011 ATGAAGCTCTCAACTTCTTCTTATGCATCCCCATCACCTTCATCCACCGTTAGTTTTGACCCAACTATGTGCAACTCCAAAAGCACCACATCAGGGTGTCTCACAGCCATCTTACGCAAGATCCTTTGCTCTTGTGGCCTTCCAACAGACCCTTCAGATCAAAAAAGAGAACTTGATTCATCAAATTCAATAGTGAGTGGCAAAGATCAAAACTTGAAGGCTAAGCAGAATGCTGAGGCTGCTATTACTACTACTACTACTACTGCTCCTCCTCCTGGGATAGTTGCAAGGTTAATGGGTTTGGAATCAATGGGAGAGATACCCTATGCATCAACACCAAATTCATTATCACGTAGCCGATCCATGAATTCTTTGGATCATTTGGGAGAATGCAATGGATTGCAGGGTCCACATAAACGGGTTAACTCCACATTGTCGTTTAGGGAGGCACCAAATAATTTCCTCTTACTTAAAAATGAGAACTTTTTGGTACTTAGCTTTGAAACTGAAGGTGAGAGTAGAGAATTCAAATCCAATGGGAGAAAAAGAGAAATGGGTTCTGCAGAATTGAAGCAGAAAGTGCCAAAAGAGAGAGGTGTGTTGAAGGAAAATAAGAGAGAAAAGGTTTATGATGAGAAGATTTTGATTCAAAAGAGGAAACTGAGCAAAAGGGTGTCTGATATGTCTTGTGGAAATGTTGGAAATGATGGTAAAAAACTTCAAGAAATCACCAACATTTCGTATCCCTTCAAGGCTACATCTAAAAAGAAGTGTTCTGATTCCGAAGCAGTGAAATTGTTACAGCCCAAGAACAGCAAGGAAGCTGTGATTGGTGAAAAGCTGAAGAGGAGGAAGAAGAAAACAAGTTGTTACTCAGAAAAAAAGACAGAAACTGAATGCAAGTCAGAAGATTCAAGCCCAGTTTCTGTCCTTGAATTTGAGCGTGAAGCTTGTGGAACAGTTGGTTTGAGTTCAAGAAGAAAATTGTCACCAGAGCTTGAAAATGACCAGCACTTTAATCTGCGTTCTGATAGTAACTTGATGATTGAAGAGAATAAGGTTAAGGAAACTGAGAGCAACAAATGTGAAGGATCAAAGAAAAAAGAGAAGCACAGCCAGGAGTATATACATAATTGGGGTGAAGTTTCCAAGCTAGTTAAAGATGAATTGGTTGGATCAAACAAGATACATGCATGGATGAATAAACAAGGTGATTTAGGAAGCATAAGTGCTGATTTTGAGTCAGAAATTTTTGATCAATTGTTAAATGAGCTGATAGATCAACTTGTTGGTCATCCACTGACAACTTTGTAA 1314 0.3912 MKLSTSSYASPSPSSTVSFDPTMCNSKSTTSGCLTAILRKILCSCGLPTDPSDQKRELDSSNSIVSGKDQNLKAKQNAEAAITTTTTTAPPPGIVARLMGLESMGEIPYASTPNSLSRSRSMNSLDHLGECNGLQGPHKRVNSTLSFREAPNNFLLLKNENFLVLSFETEGESREFKSNGRKREMGSAELKQKVPKERGVLKENKREKVYDEKILIQKRKLSKRVSDMSCGNVGNDGKKLQEITNISYPFKATSKKKCSDSEAVKLLQPKNSKEAVIGEKLKRRKKKTSCYSEKKTETECKSEDSSPVSVLEFEREACGTVGLSSRRKLSPELENDQHFNLRSDSNLMIEENKVKETESNKCEGSKKKEKHSQEYIHNWGEVSKLVKDELVGSNKIHAWMNKQGDLGSISADFESEIFDQLLNELIDQLVGHPLTTL 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi488g00011 437 MobiDBLite consensus disorder prediction 1 21 - -
Gabi488g00011 437 PANTHER OS05G0128300 PROTEIN 15 433 - -
Gabi488g00011 437 MobiDBLite consensus disorder prediction 51 72 - -
Gabi488g00011 437 MobiDBLite consensus disorder prediction 58 72 - -
Gabi488g00011 437 Pfam DUF761-associated sequence motif 91 104 IPR032795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi488g00011 Gabi-Chr488 123260 124746 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi488g00011 26 437 TRM (TON1 Recruiting Motif) Superfamily AT5G58630 29.466 3.51e-19 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi488g00011 - - gmx:102660067 508.449