Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4886g00008 ATGGCCTCAAACGGATATTTCTGTGTTGTCATCTTTGCAGCTATCGCAACCACAACATTCTCAGCACTGTCACCTAATTACTATGATTACTCGTGCCCTAACGCTTTGAGCACCATCCGAAAAGTCGTGGATGCTGCCGTACAGAAAGAACGCCGTATGGGTGCATCTTTACTGCGCTTGCACTTCCATGATTGCTTTGTTAATGGTTGTGATGGTTCAATTCTTCTAGACCCCACATCTACCATTGATAGCGAAAAGAATGCAAACCCTAATTTCCAATCAGCTAGAGGATTTGAAGTGGTGGATGAGATCAAGCAAGCAGTGGACGAAGCATGTGGAAAACCAGTTGTTTCTTGCGCAGACATATTAGCTGTAGCCTCAAGAGACTCTGTCGTTGCGTTAGGCGGTCCAACTTGGAAGGTGAGACTTGGGAGAAGAGACTCAACCACAGCAAGCCGTGATGATGCAAATGCTGACATCCCAGCACCATTTTTCAGCCTTTCTCAACTTATTACCAACTTCCAGAACCATGGTCTAGATGAGAAGGACCTTGTTGTTCTTGCTGGAGCCCACACCATTGGATTTGCACGTTGTGTTACATTTAGGGATCATATCTACAATGACTCTAACATTAATCTCTACTTTGCAAAAGCGCTTAAATACATTTGCCCAAAAAATGGAGGTGACTTCAACCTTGCTCCTTTGGACCCAACTCCTGCACACTTTGATGCAGCCTACTACGCTGATTTGGTTCAAAAGAGAGGGATTCTTCACTCTGATCAGGAACTTTTCAACGGTGGTTCTACTGATGCATTGGTTAAAAAATACAAGCACAATACCGTAGCTTTCTACAAGGACTTTGCAAAGTCTATTATTAAGATGGGAAATATGAAGCCCCTCACTGGGAATCAAGGTGAAGTTCGTTTGAACTGCAGGAAAGTGAACTAA 948 0.4367 MASNGYFCVVIFAAIATTTFSALSPNYYDYSCPNALSTIRKVVDAAVQKERRMGASLLRLHFHDCFVNGCDGSILLDPTSTIDSEKNANPNFQSARGFEVVDEIKQAVDEACGKPVVSCADILAVASRDSVVALGGPTWKVRLGRRDSTTASRDDANADIPAPFFSLSQLITNFQNHGLDEKDLVVLAGAHTIGFARCVTFRDHIYNDSNINLYFAKALKYICPKNGGDFNLAPLDPTPAHFDAAYYADLVQKRGILHSDQELFNGGSTDALVKKYKHNTVAFYKDFAKSIIKMGNMKPLTGNQGEVRLNCRKVN 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4886g00008 315 CDD secretory_peroxidase 23 314 IPR033905 GO:0004601|GO:0042744
Gabi4886g00008 315 Gene3D - 26 315 - -
Gabi4886g00008 315 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Gabi4886g00008 315 ProSitePatterns Peroxidases active site signature. 54 65 IPR019794 GO:0004601
Gabi4886g00008 315 ProSiteProfiles Plant heme peroxidase family profile. 22 315 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4886g00008 315 PANTHER PEROXIDASE 72-RELATED 21 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4886g00008 315 Gene3D Peroxidase, domain 2 161 294 - -
Gabi4886g00008 315 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4886g00008 315 PRINTS Haem peroxidase superfamily signature 235 250 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4886g00008 315 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4886g00008 315 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4886g00008 315 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4886g00008 315 SUPERFAMILY Heme-dependent peroxidases 23 315 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gabi4886g00008 315 FunFam Peroxidase 26 168 - -
Gabi4886g00008 315 FunFam Peroxidase 161 294 - -
Gabi4886g00008 315 PRINTS Plant peroxidase signature 249 266 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4886g00008 315 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4886g00008 315 PRINTS Plant peroxidase signature 233 248 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4886g00008 315 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4886g00008 315 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4886g00008 315 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4886g00008 315 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4886g00008 315 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4886g00008 315 PRINTS Plant peroxidase signature 289 302 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4886g00008 315 Pfam Peroxidase 40 278 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4886g00008 Gabi-Chr4886 120100 122091 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4886g00008 23 315 Peroxidase AT5G05340 58.446 1.33e-124 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4886g00008 K00430 - gmx:100812820 513.072