Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4886g00007 ATGGGTGCATCTTTACTGCGCTTGCACTTCCATGATTGCTTTGTTAATGGTTGTGATGGTTCAATTCTTCTAGACCCCACATCTACCATTGATAGCGAAAAGAATGCAAACCCTAATTTCCAATCAGCTAGAGGATTTGAAGTGGTGGATGAGATCAAGCAAGCAGTGGACGAAGCATGTGGAAAACCAGTTGTTTCTTGCGCAGACATATTAGCTGTAGCCTCAAGAGACTCTGTCGTTGCGTTAGGCGGTCCAACTTGGAAGGTGAGACTTGGGAGAAGAGACTCAACCACAGCAAGCCGTGATGATGCAAATGCTGACATCCCAGCACCATTTTTCAGCCTTTCTCAACTTATTACCAACTTCCAGAACCATGGTCTAGATGAGAAGGACCTTGTTGTTCTTGCTGGAGCCCACACCATTGGATTTGCACGTTGTGTTACATTTAGGGATCATATCTACAATGACTCTAACATTAATCTCTACTTTGCAAAAGCGCTTAAATACATTTGCCCAAAAAATGGAGGTGACTTCAACCTTGCTCCTTTGGACCCAACTCCTGCACACTTTGATGCAGCCTACTACGCTGATTTGGTTCAAAAGAGAGGGATTCTTCACTCTGATCAGGAACTTTTCAACGGTGGTTCTACTGATGCATTGGTTAAAAAATACAAGCACAATACCGTAGCTTTCTACAAGGACTTTGCAAAGTCTATTATTAAGATGGGAAATATGAAGCCCCTCACTGGGAATCAAGGTGAAGTTCGTTTGAACTGCAGGAAAGTGAACTAA 792 0.4306 MGASLLRLHFHDCFVNGCDGSILLDPTSTIDSEKNANPNFQSARGFEVVDEIKQAVDEACGKPVVSCADILAVASRDSVVALGGPTWKVRLGRRDSTTASRDDANADIPAPFFSLSQLITNFQNHGLDEKDLVVLAGAHTIGFARCVTFRDHIYNDSNINLYFAKALKYICPKNGGDFNLAPLDPTPAHFDAAYYADLVQKRGILHSDQELFNGGSTDALVKKYKHNTVAFYKDFAKSIIKMGNMKPLTGNQGEVRLNCRKVN 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4886g00007 263 Pfam Peroxidase 1 226 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4886g00007 263 SUPERFAMILY Heme-dependent peroxidases 1 263 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gabi4886g00007 263 ProSitePatterns Peroxidases active site signature. 2 13 IPR019794 GO:0004601
Gabi4886g00007 263 PANTHER PEROXIDASE 72-RELATED 1 262 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4886g00007 263 ProSiteProfiles Plant heme peroxidase family profile. 1 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4886g00007 263 CDD secretory_peroxidase 1 262 IPR033905 GO:0004601|GO:0042744
Gabi4886g00007 263 PRINTS Haem peroxidase superfamily signature 2 16 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4886g00007 263 PRINTS Haem peroxidase superfamily signature 65 82 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4886g00007 263 PRINTS Haem peroxidase superfamily signature 83 95 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4886g00007 263 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4886g00007 263 PRINTS Haem peroxidase superfamily signature 131 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4886g00007 263 FunFam Peroxidase 109 242 - -
Gabi4886g00007 263 Gene3D Peroxidase, domain 2 109 242 - -
Gabi4886g00007 263 ProSitePatterns Peroxidases proximal heme-ligand signature. 131 141 IPR019793 -
Gabi4886g00007 263 Gene3D - 1 260 - -
Gabi4886g00007 263 PRINTS Plant peroxidase signature 64 74 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4886g00007 263 PRINTS Plant peroxidase signature 44 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4886g00007 263 PRINTS Plant peroxidase signature 4 24 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4886g00007 263 PRINTS Plant peroxidase signature 197 214 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4886g00007 263 PRINTS Plant peroxidase signature 130 142 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4886g00007 263 PRINTS Plant peroxidase signature 181 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4886g00007 263 PRINTS Plant peroxidase signature 237 250 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4886g00007 263 PRINTS Plant peroxidase signature 83 98 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4886g00007 Gabi-Chr4886 115127 122091 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4886g00007 1 263 Peroxidase AT5G05340 59.398 1.59e-112 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4886g00007 K00430 - gmx:100812820 454.521