Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4886g00005 ATGGGTGCATCATTGCTCCGTCTTCATTTCCATGATTGCTTTGTCCAAGGATGTGATGCATCAGTACTGCTAAGCAACACAGCAACATTCACAGGTGAACAAAGTGCCTTTCCAAACGTTAATTCTCTAAGGGGTTTCGATGTCATAGAGAACATTAAAGCTAAACTTGAGAGCTTGTGTCCTGGTGTTGTCTCTTGCGCTGACATCGTAGCCGTTGCTGCAAGGGATTCTGTTGTTGCTCTAGGTGGAACTACTTGGCAAGTTCACTTGGGCAGAAGAGACTCAACCACTGCAAGCTTAAGTGATGCTAACTCAGATTTACCCTCTCCCTTTCTGGATCTTAATGGCCTTGTCGCTGCTTTCCAAAAAAAGGGTTTCACGGTCGATGAAATGGTTGCTTTATCAGGTGCTCATACAATAGGCAAAGCCAGATGTTCACTCTTCCGAACAAGGATTTATAACGAAAGCAACATAAATCCGTTGTTTGCAAAATCATTGCAAGAAAATTGTCCCCTGATAGGTGGTGATGACAACTTATCTCCTATAGACACCACCACTCCAAACTTTTTTGATAGTGCTTACTACAGGAATTTAATCAACAAAAAAGGTCTTTTTCACTCTGACCAACAACTCTTCAATGGTGATTCTACAAATCAAAAAGTTTTAGAGTACGCCACGAACCCACTACTCTTCAGACTAGATTTTGGTAATGCGATGATCAAGATGGGCAACCTTAGCCCACTAACTAGCACACAGGGTCAGATCAGAAAAATATGCAGCAGAGTGAATTGA 792 0.4205 MGASLLRLHFHDCFVQGCDASVLLSNTATFTGEQSAFPNVNSLRGFDVIENIKAKLESLCPGVVSCADIVAVAARDSVVALGGTTWQVHLGRRDSTTASLSDANSDLPSPFLDLNGLVAAFQKKGFTVDEMVALSGAHTIGKARCSLFRTRIYNESNINPLFAKSLQENCPLIGGDDNLSPIDTTTPNFFDSAYYRNLINKKGLFHSDQQLFNGDSTNQKVLEYATNPLLFRLDFGNAMIKMGNLSPLTSTQGQIRKICSRVN 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4886g00005 263 Pfam Peroxidase 1 226 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4886g00005 263 ProSitePatterns Peroxidases proximal heme-ligand signature. 130 140 IPR019793 -
Gabi4886g00005 263 FunFam Peroxidase 108 242 - -
Gabi4886g00005 263 ProSitePatterns Peroxidases active site signature. 2 13 IPR019794 GO:0004601
Gabi4886g00005 263 PANTHER PEROXIDASE 72-RELATED 1 262 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4886g00005 263 Gene3D Peroxidase, domain 2 108 242 - -
Gabi4886g00005 263 CDD secretory_peroxidase 1 262 IPR033905 GO:0004601|GO:0042744
Gabi4886g00005 263 PRINTS Plant peroxidase signature 63 73 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4886g00005 263 PRINTS Plant peroxidase signature 4 24 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4886g00005 263 PRINTS Plant peroxidase signature 197 214 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4886g00005 263 PRINTS Plant peroxidase signature 237 250 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4886g00005 263 PRINTS Plant peroxidase signature 82 97 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4886g00005 263 PRINTS Plant peroxidase signature 129 141 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4886g00005 263 PRINTS Plant peroxidase signature 44 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4886g00005 263 PRINTS Plant peroxidase signature 181 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4886g00005 263 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4886g00005 263 PRINTS Haem peroxidase superfamily signature 64 81 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4886g00005 263 PRINTS Haem peroxidase superfamily signature 130 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4886g00005 263 PRINTS Haem peroxidase superfamily signature 82 94 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4886g00005 263 PRINTS Haem peroxidase superfamily signature 2 16 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4886g00005 263 Gene3D - 1 260 - -
Gabi4886g00005 263 ProSiteProfiles Plant heme peroxidase family profile. 1 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4886g00005 263 SUPERFAMILY Heme-dependent peroxidases 1 263 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4886g00005 Gabi-Chr4886 84532 86700 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4886g00005 1 263 Peroxidase AT5G05340 58.868 2.25e-115 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4886g00005 K00430 - gmx:100811432 410.609