Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4886g00002 ATGGATAATTTTATATATTCAGATTTGTCTTCATTTAGTCCTGACAGTGAATATGGTGATGAACAAAGAGAGATGCCGGTGGTTGTGAGTAAGGATCAAGATGGATATGAATCAAAAATTGGAATGTTGTTTTCAAATGAAGATGAAGCTTATAAGTTTTATAATGGATATGCTAAATTGGTTGGTTTTACTGTGAGAAAATCAAGATATCGAAGATTGTCAGATGGAACCATAAGTCAGAGAACATATGTTTGTGGAAAAGAAGGATATAGAAAATTGAAGGACCCTTCATATGTGAACAAGAAAAATAGAAGAGAAACAAGAACTAGTTGTCAAGCTATGATAAGTTTTAACATTGAGAAGAATACTTGGATGAAGCACATGCTAATATGA 393 0.3206 MDNFIYSDLSSFSPDSEYGDEQREMPVVVSKDQDGYESKIGMLFSNEDEAYKFYNGYAKLVGFTVRKSRYRRLSDGTISQRTYVCGKEGYRKLKDPSYVNKKNRRETRTSCQAMISFNIEKNTWMKHMLI 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4886g00002 130 Pfam FAR1 DNA-binding domain 52 122 IPR004330 -
Gabi4886g00002 130 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 16 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4886g00002 Gabi-Chr4886 23451 23843 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gabi4886g00002 FAR1 6e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4886g00002 - K17604 pop:18110271 95.9005