Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4881g00004 ATGGATTTGGAAGCTGTAGCAGAAACTGTTGAAGGTTCTGCTAGGAAAATATCAGCAGTGTGTGAAGGAAGTTCAATTTTGGAACCGTGTGTTGGTATGGAGTTTGAGTCTGAAGATTCTGCCAAGCATTTTTATGATGAATATGCAAGACGGGAAGGGTTCATTGTTCGCCTTGATCGCTGTCATCGTTCCGAGGTTGACAATAGGATCACTTCGCGCCGTTTTTCATGTAATAAGCAAGGTTTTTATGTGAGAGGTAGAAATGGAGCCAGGCTTGTTCATAAACCTCGAGCTAGCATAAGAGAAGGCTGTGAAGCAATGTTGTTGATTAAAGTTAATAAATGTGGAAAGTGGGTTGTTACTAAATTTGTAAAAGAGCATAGTCATCCGCTACATGCTTCTAGTTCTCCATCTTATACAATGATGGATTCAAAGGATAGGAAGATCCAACAACTCACCAAGGAACTTCAGCATCGAGATCTACAATGTCAACAATATCGCAGGCTGCTACTTTCTCTTCTGGAAACTGTTGATGAGCAAACAGAACTTTTATCAAGAAAAGTTGAACTTGTTGTTAACCGTGTAAAACAACTAGAGAATGAAGAGCAAAAACCTTTGGACACTCACTAA 630 0.3968 MDLEAVAETVEGSARKISAVCEGSSILEPCVGMEFESEDSAKHFYDEYARREGFIVRLDRCHRSEVDNRITSRRFSCNKQGFYVRGRNGARLVHKPRASIREGCEAMLLIKVNKCGKWVVTKFVKEHSHPLHASSSPSYTMMDSKDRKIQQLTKELQHRDLQCQQYRRLLLSLLETVDEQTELLSRKVELVVNRVKQLENEEQKPLDTH 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4881g00004 209 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 16 202 - -
Gabi4881g00004 209 Pfam FAR1 DNA-binding domain 43 132 IPR004330 -
Gabi4881g00004 209 Coils Coil 181 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4881g00004 Gabi-Chr4881 83621 86715 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gabi4881g00004 FAR1 9.9e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4881g00004 - - pvu:PHAVU_010G032600g 299.286