Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4874g00010 ATGCCCATTCATAAGGAAATGGACTATACTTATCTAACTAACTTACTTCAAGAGTTCACTAGTATTTCCAACATTGACAATGCATGGCTTTTTAAGTCACAAGGGAATCTGGGTTTGCAGGGAATGTTTTCTATTACCCAGCCAGATCTTTTAGCAAACATGAGGAGAAGATTCATCCTATCATGTAACATTTTAAAAGAAAGTGACAATTCTGTCAAGTTTCTGTGGGCTCCATTTCCAATAGAAATGTCTGGCGTGTCTATGATTGTTCCATCACCTTCTGGTTCAAAACTTTTAGTGATTCGAAATCCCGAGAATGAAGCTCCTTCTCGGTTTGAGATTTGGAGTTCATCTCAAATGGAGAAGGAGTTCCATATCCCTCAATCACTGCATGGCTCAGTATATAATGATGGATGGTTTGAGGCTGTCTCTTGGAACATGGATGAAACATTTATAGCATATGTAGCAGAAGAGCCCTATCCGGCAAAGCCCACATTTAATGATGTGGGCTACAAGAAAGGTGATTCTACAGACAAGGATTTTGGTAGCTGGAAAGGTCAAGGGGACTGGGAGGAGGATTGGGGAGAAACATATGCTGGAAAGAGACGGCCTGCGCTTTTTGTTATCAACATCAACAGTGGAGAGGCAAAAGCTGTCAAAGGAATTGACAAATCTTTGAGTGTTGGCCAAGTTGTGTGGGCTCCATTTACCGAAGGCTCAGAACAGTACCTTGTTTTTGTTGGGTGGTCATCTGAGACAAGAAAGCTTGGTATGAAGTACTGCTCTAACAGGCCTTGTGCATTATATGCTGTTAGAGCACCACATCATGATTCAAAATCTAAGGAACAAGAGCTCCACTCAACTGAAGAATTTCATACACTGAACCTTACTCAAACCATAAGCAGTGCCCTCTTTCCGCGATTCAGCCCAGATGGAAAGTTCCTTGTGTTTTTATCTGCTAGAAGTGCTGTGGATTCTGGAGTGCACAATGCTACAAATTCACTTCATAGAATTGATTGGACTGATGGAAAACTGTACCAATCTGCCAAAATTTATGATATTATTCCTGTTGTTCTGTGTGCTGAGGATGGTTGCTTCCCCGGGCTTTATTGTATGACTGTCCATAATAATCCTTGGCTTTCTGACAACTGCACAATGATCATATCATCCGTCTGGCACAGCAGTGAAGTTCTACTCTCTGTGAACGTGTTGAGTGGGGAATTATTGCATATCAGCCCAGCAGACTCAAATTTTTCATGGAATCTTCTTATGCTTGATGGGAACAATATTGTTGCCATTTCCAGAAGTCCAGTCGATGTTCCTCAAATCAAGTATGGAATGTTCAATGAGAAGGCAAAGAGAAATGCTACATGGGGCTGGTCAAATATACCTAGTCCCATATTCAGATGCTCTGACAAGGTTAGATCTTTGCTGTCCTCTCTTCAGTGCAGTATACTGAAGATCTCAGTCAAGGATGCTTGTGATGGTCCAACAAAAGGTGCTACTAAACCTTTTGAAGCTATATTTGTGTCATCAAAAACCAAGAAAAAGGATGTATTCGATCCATTAATTGTGATCCTTCATGGAGGGCCACAGGATGTCTCTTTGTCATGCTTTTCAAAGTCTTTAGCCTTTCTATCTTCAGTTGGATACAGCTTGCTGATTGTAAATTATAGAGGTTCATTAGGATTTGGTGAGGAAGCGTTGCAATCTCTTCCAGGGAAAGTTGGGTCTCAGGATGTCAATGATGTTCTCTCTGCCATAGATCATGTCATCAACTTGGGTCTTGCCAGTCCATCCAAGATTACGGTGATGGGTATTTCACATGGTGGCTTTTTGACAACCCACTTGATTGGCCAGGCACCGGAGAAGTTTGTAGCAGCAGCTGCAATCAATCCTGTTTGTAACTTTGCACTGATGGTTGGTACAACTGATATTCCTGATTGGTGCTATGTAGAGACCTTTGGAACCATTGCCAGAAATTGCTTTACTAAAGCACCTTCAGCAGAAGATTTGACTCTCTTTTATAGCAAGTCTCCTATTTCACACGCCTCAAAGGTAAAAGCACCAACACTTTTCCTGTTAGGTTCTCAAGATCTTCGTGTTCCAATTTTTGATGGATTGCAATATGCTAGGGCCTTAAAGGAGAAAGGTGTAGAGGTCAAAATCATCATGTTTCAAAATGACGTTCATGCACTCAAAAGGCCACAGTCTGAATTTGAATGCTTCGTTAACATCGGGGTGTGGTTCAACAAGTACTGCAAATAA 2268 0.4145 MPIHKEMDYTYLTNLLQEFTSISNIDNAWLFKSQGNLGLQGMFSITQPDLLANMRRRFILSCNILKESDNSVKFLWAPFPIEMSGVSMIVPSPSGSKLLVIRNPENEAPSRFEIWSSSQMEKEFHIPQSLHGSVYNDGWFEAVSWNMDETFIAYVAEEPYPAKPTFNDVGYKKGDSTDKDFGSWKGQGDWEEDWGETYAGKRRPALFVININSGEAKAVKGIDKSLSVGQVVWAPFTEGSEQYLVFVGWSSETRKLGMKYCSNRPCALYAVRAPHHDSKSKEQELHSTEEFHTLNLTQTISSALFPRFSPDGKFLVFLSARSAVDSGVHNATNSLHRIDWTDGKLYQSAKIYDIIPVVLCAEDGCFPGLYCMTVHNNPWLSDNCTMIISSVWHSSEVLLSVNVLSGELLHISPADSNFSWNLLMLDGNNIVAISRSPVDVPQIKYGMFNEKAKRNATWGWSNIPSPIFRCSDKVRSLLSSLQCSILKISVKDACDGPTKGATKPFEAIFVSSKTKKKDVFDPLIVILHGGPQDVSLSCFSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLSAIDHVINLGLASPSKITVMGISHGGFLTTHLIGQAPEKFVAAAAINPVCNFALMVGTTDIPDWCYVETFGTIARNCFTKAPSAEDLTLFYSKSPISHASKVKAPTLFLLGSQDLRVPIFDGLQYARALKEKGVEVKIIMFQNDVHALKRPQSEFECFVNIGVWFNKYCK 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4874g00010 755 Pfam WD40-like Beta Propeller Repeat 305 328 IPR011659 -
Gabi4874g00010 755 Gene3D alpha/beta hydrolase 502 753 IPR029058 -
Gabi4874g00010 755 Pfam Acylamino-acid-releasing enzyme, N-terminal domain 6 277 IPR045550 -
Gabi4874g00010 755 PANTHER SERINE PEPTIDASE S9 FAMILY MEMBER 6 754 - -
Gabi4874g00010 755 SUPERFAMILY DPP6 N-terminal domain-like 82 442 - -
Gabi4874g00010 755 SUPERFAMILY alpha/beta-Hydrolases 522 754 IPR029058 -
Gabi4874g00010 755 FunFam Acylamino-acid-releasing enzyme 495 754 - -
Gabi4874g00010 755 Pfam Prolyl oligopeptidase family 539 753 IPR001375 GO:0006508|GO:0008236
Gabi4874g00010 755 ProSitePatterns Prolyl endopeptidase family serine active site. 583 613 IPR002471 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4874g00010 Gabi-Chr4874 103804 112583 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4874g00010 522 738 Carbohydrate Esterase AT5G36210 24.424 4.16e-16 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4874g00010 K01303 - gmx:100812681 1305.04