LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gabi4874g00008	ATGCCCATTCATAAGGAAATGGACTATACTTATCTAACTAACTTACTTCAAGAGTTCACTAGTATTTCCAACATTGACAATGCATGGCTTTTTAAGTCACAAGGGAATCTGGGTTTGCAGGGAATGTTTTCTATTACCCAGCCAGATCTTTTAGCAAACATGAGGAGAAGATTCATCCTATCATGTAACATTTTAAAAGAAAGTGACAATTCTGTCAAGTTTCTGTGGGCTCCATTTCCAATAGAAATGTCTGGCGTGTCTATGATTGTTCCATCACCTTCTGGTTCAAAACTTTTAGTGATTCGAAATCCCGAGAATGAAGCTCCTTCTCGGTTTGAGATTTGGAGTTCATCTCAAATGGAGAAGGAGTTCCATATCCCTCAATCACTGCATGGCTCAGTATATAATGATGGATGGTTTGAGGCTGTCTCTTGGAACATGGATGAAACATTTATAGCATATGTAGCAGAAGAGCCCTATCCGGCAAAGCCCACATTTAATGATGTGGGCTACAAGAAAGGTGATTCTACAGACAAGGATTTTGGTAGCTGGAAAGGTCAAGGGGACTGGGAGGAGGATTGGGGAGAAACATATGCTGGAAAGAGACGGCCTGCGCTTTTTGTTATCAACATCAACAGTGGAGAGGCAAAAGCTGTCAAAGGAATTGACAAATCTTTGAGTGTTGGCCAAGTTGTGTGGGCTCCATTTACCGAAGGCTCAGAACAGTACCTTGTTTTTGTTGGGTGGTCATCTGAGACAAGAAAGCTTGGTATGAAGTACTGCTCTAACAGGCCTTGTGCATTATATGCTGTTAGAGCACCACATCATGATTCAAAATCTAAGGAACAAGAGCTCCACTCAACTGAAGAATTTCATACACTGAACCTTACTCAAACCATAAGCAGTGCCCTCTTTCCGCGATTCAGCCCAGATGGAAAGTTCCTTGTGTTTTTATCTGCTAGAAGTGCTGTGGATTCTGGAGTGCACAATGCTACAAATTCACTTCATAGAATTGATTGGACTGATGGAAAACTGTACCAATCTGCCAAAATTTATGATATTATTCCTGTTGTTCTGTGTGCTGAGGATGGTTGCTTCCCCGGGCTTTATTGTATGACTGTCCATAATAATCCTTGGCTTTCTGACAACTGCACAATGATCATATCATCCGTCTGGCACAGCAGTGAAGTTCTACTCTCTGTGAACGTGTTGAGTGGGGAATTATTGCATATCAGCCCAGCAGACTCAAATTTTTCATGGAATCTTCTTATGCTTGATGGGAACAATATTGTTGCCATTTCCAGAAGTCCAGTCGATGTTCCTCAAATCAAGTATGGAATGTTCAATGAGAAGGCAAAGAGAAATGCTACATGGGGCTGGTCAAATATACCTAGTCCCATATTCAGATGCTCTGACAAGGTTAGATCTTTGCTGTCCTCTCTTCAGTGCAGTATACTGAAGATCTCAGTCAAGGATGCTTGTGATGGTCCAACAAAAGGTGCTACTAAACCTTTTGAAGCTATATTTGTGTCATCAAAAACCAAGAAAAAGGATGTATTCGATCCATTAATTGTGATCCTTCATGGAGGGCCACAGGATGTCTCTTTGTCATGCTTTTCAAAGTCTTTAGCCTTTCTATCTTCAGTTGGATACAGCTTGCTGATTGTAAATTATAGAGGTTCATTAGGATTTGGTGAGGAAGCGTTGCAATCTCTTCCAGGGAAAGTTGGGTCTCAGGATGTCAATGATGTTCTCTCTGCCATAGATCATGTCATCAACTTGGGTCTTGCCAGTCCATCCAAGATTACGGTGATGGGTATTTCACATGGTGGCTTTTTGACAACCCACTTGATTGGCCAGGCACCGGAGAAGTTTGTAGCAGCAGCTGCAATCAATCCTGTTTGTAACTTTGCACTGATGGTTGGTACAACTGATATTCCTGATTGGTGCTATGTAGAGACCTTTGGAACCATTGCCAGAAATTGCTTTACTAAAGCACCTTCAGCAGAAGATTTGACTCTCTTTTATAGCAAGTCTCCTATTTCACACGCCTCAAAGGTAAAAGCACCAACACTTTTCCTGTTAGGTTCTCAAGATCTTCGTGTTCCAATTTTTGATGGATTGCAAGGCCTTAAAGGAGAAAGGTGTAGAGGTCAAAATCATCATGTTTCAAAATGA	2178	0.4141	MPIHKEMDYTYLTNLLQEFTSISNIDNAWLFKSQGNLGLQGMFSITQPDLLANMRRRFILSCNILKESDNSVKFLWAPFPIEMSGVSMIVPSPSGSKLLVIRNPENEAPSRFEIWSSSQMEKEFHIPQSLHGSVYNDGWFEAVSWNMDETFIAYVAEEPYPAKPTFNDVGYKKGDSTDKDFGSWKGQGDWEEDWGETYAGKRRPALFVININSGEAKAVKGIDKSLSVGQVVWAPFTEGSEQYLVFVGWSSETRKLGMKYCSNRPCALYAVRAPHHDSKSKEQELHSTEEFHTLNLTQTISSALFPRFSPDGKFLVFLSARSAVDSGVHNATNSLHRIDWTDGKLYQSAKIYDIIPVVLCAEDGCFPGLYCMTVHNNPWLSDNCTMIISSVWHSSEVLLSVNVLSGELLHISPADSNFSWNLLMLDGNNIVAISRSPVDVPQIKYGMFNEKAKRNATWGWSNIPSPIFRCSDKVRSLLSSLQCSILKISVKDACDGPTKGATKPFEAIFVSSKTKKKDVFDPLIVILHGGPQDVSLSCFSKSLAFLSSVGYSLLIVNYRGSLGFGEEALQSLPGKVGSQDVNDVLSAIDHVINLGLASPSKITVMGISHGGFLTTHLIGQAPEKFVAAAAINPVCNFALMVGTTDIPDWCYVETFGTIARNCFTKAPSAEDLTLFYSKSPISHASKVKAPTLFLLGSQDLRVPIFDGLQGLKGERCRGQNHHVSK	725

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gabi4874g00008	725	Pfam	Acylamino-acid-releasing enzyme, N-terminal domain	6	277	IPR045550	-
	Gabi4874g00008	725	Pfam	Prolyl oligopeptidase family	539	709	IPR001375	GO:0006508\|GO:0008236
	Gabi4874g00008	725	Gene3D	alpha/beta hydrolase	501	724	IPR029058	-
	Gabi4874g00008	725	SUPERFAMILY	alpha/beta-Hydrolases	522	713	IPR029058	-
	Gabi4874g00008	725	PANTHER	SERINE PEPTIDASE S9 FAMILY MEMBER	6	709	-	-
	Gabi4874g00008	725	SUPERFAMILY	DPP6 N-terminal domain-like	82	442	-	-
	Gabi4874g00008	725	ProSitePatterns	Prolyl endopeptidase family serine active site.	583	613	IPR002471	GO:0004252\|GO:0006508
	Gabi4874g00008	725	Pfam	WD40-like Beta Propeller Repeat	305	328	IPR011659	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Gabi4874g00008	Gabi-Chr4874	103804	112583	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gabi4874g00008	522	699	Carbohydrate Esterase	AT5G36210	25.281	1.77e-11	65.9

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gabi4874g00008	K01303		-	gmx:100812681	1216.06

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