Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4870g00004 ATGATGGATTGGAGAAAACTTGGTTTGTTTATCTGTGCTTTTTCTATCCTGCCCTTGGGATGTTTTTGTGCCACCTTTGTTCCAGTGGATAATTATCTTATAAACTGTGGAGCTTCTGCAAATACTCTAGTAGGTAACCGCAATTTCACAGCAGATAATTTATCTAAGAATCTCCTTTCCACCCCACAAGATATTCTTGCAAATACCTCCTTAAAATCAATTCCTTCTTCCCCTGATGATTCATCTCTCTATCAAACGGCAAGAATCTTCAGTGGATCCTCAAAGTACACTTTTCCAATTAAGCAAAAGGGGAGACACTGGATCCGTCTTTATTTTTTTCCATTCACTTATCAGCAATACAATTTGAGTGCTGCAAATTTCTCTGTTTCCACCCAAAACATTTTCCTTCTCAGCAGTAATTTAACTGTGCAGAAAAATACTGTCATGAAGGAATACTCTGTCAGGGTGACCTCAGACACCCTTGTGATCACCTTTACCCCTTCAAACAATTCCCTTGCCTTTGTAAATGCCATTGAAGTTGTGTCTATACCTGATGAGCTCATTGCTGATGATGCTCTCACCCTAAATCCATTAGCAAAGTACTCTGGGTTGGTAACACAGGCATTGGAGACAGTTTGGAGGATTAACATGGGTGGTCCAACTGTCTCCTCTGGAAATGACACCCTTCATCGAACTTGGGTTCCGGATCAAAGGTTCATTATACAACCTAACCTTGCCTCTGATGTTTCGAATATTGGTGCTGTTCATTATCAAGCTGGTGGGGCAACAGAAAACACTGCTCCATCTAATGTTTATGGTACTGTCGCGGAGATGAACACAAGCGGTGATCCCCGTAGTAATTTCAATATGACATGGCAGTTTGATGTGGATCCTGGATTTCAGTACCTTGTTCGAGCTCACTTCTGTGATATAGTCAGTCCGAGTCTCAACGAACTCTACTTCAACGTTTATATTGACTCCTTGTTGGCTGCCAAGGATGTTGATCCGAGTAATATAAATATTAATGTTTTGGCTGTTCCATTTTATAGGGATTTTGTTACATCCTTGGCTGTCAGAAATAAACTTGTCATAAGTATTGGCCCTTCTACTCTAAATCCGGACTCTCCTAATGCCATTTTGAATGGGCTGGAGATCATGAAAATGAACAATTCTATGGGCAGTCTCAGTGCAGGAACAGGATCTGTGGCTATTACTTCTGGTTCGAGTTCTAAGAAAGTTGGCATGATAGTGGGTGTGAGTGTTGGGGCATTTAGTGCAGTGGTCTTGGCTGGAGTTTTCGTTGTTCTATGCCAGAAAAGAAGACGGTTGGCACGACAAAGGCAGTCAAAGACATGGGTTCCTTTATCCATCAATGATGGAACTTCCCATACCATGGGAAGTAAATATTCTAATGGCACAACAATAAGTGCTACTTCGAACTTTGAGTACCGTGTCCCTTTTTTGGCAGTTCAGGAGGCTACAAACAATTTTGATGAGAATTGGGTTATTGGGATAGGTGGTTTTGGGAAAGTATACAAGGGAGAATTAAGTGATGGCACAAAAGTAGCGGTTAAGAGGGGGAATCCACGGTCCCAGCAGGGGCTTGCAGAATTCCGAACTGAAATTGAAATGCTGTCTCAATTCCGGCATCGCCATCTGGTGTCATTGATTGGGTATTGTGATGAAAAGAATGAAATGATCTTGATATATGAATATATGGAGAAGGGAACTCTCAAAAGTCATCTTTACGGTTCTGGCCTTCCTAGCATAAGTTGGAAAGAGAGACTTGAGATATGCATTGGATCTGCAAGAGGACTTCATTACCTTCACACTGGCTATGCTAAAGCAGTTATTCACCGTGATGTGAAGTCTGCAAATATCCTTCTTGATGAGAACCTAATGGCTAAAGTTGCTGATTTTGGATTATCGAAGACAGGGCCTGAAATTGATCAGACACATGTGAGCACAGCTGTCAAAGGGAGTTTTGGGTACCTTGATCCAGAGTATTTCAGGAGGCAACAACTAACAGAAAAGTCAGATGTGTATTCTTTTGGGGTAGTTCTGTTTGAAGTTCTTTGTGCAAGACCCGTCATCGATCCATCCCTTCCTAGGGAAATGGTAAACTTGGCAGAATGGGCAATGAAGTGGCAGAAAAAAGGACAGTTGGAGCAAATCATAGACCCAACACTTGCAGGCAAAATCAGACCAGATTCTCTTAGAAAGTTTGGAGAAACTGCTGAAAAATGCTTGGCTGACTTTGGTGTTGATAGGCCTTCTATGGGAGATGTCTTGTGGAATTTGGAGTATGCTCTCCAACTTCAAGAGGCAGTGGTTCAAGGTGACCCTGAAGAAAACAGTACCAATATGATTGAACTCTCTCCACAGGTCAACAATTTCAACCATGATGCAAGTGCTTCTGCTGTACATTTTGAAGCTTCAAATGTGGATGATCTGTCTGGAGTTTCTATGAGTAGGGTGTTCTCACAGTTGGTGAAGTCTGAGGGTAGATGA 2511 0.4194 MMDWRKLGLFICAFSILPLGCFCATFVPVDNYLINCGASANTLVGNRNFTADNLSKNLLSTPQDILANTSLKSIPSSPDDSSLYQTARIFSGSSKYTFPIKQKGRHWIRLYFFPFTYQQYNLSAANFSVSTQNIFLLSSNLTVQKNTVMKEYSVRVTSDTLVITFTPSNNSLAFVNAIEVVSIPDELIADDALTLNPLAKYSGLVTQALETVWRINMGGPTVSSGNDTLHRTWVPDQRFIIQPNLASDVSNIGAVHYQAGGATENTAPSNVYGTVAEMNTSGDPRSNFNMTWQFDVDPGFQYLVRAHFCDIVSPSLNELYFNVYIDSLLAAKDVDPSNININVLAVPFYRDFVTSLAVRNKLVISIGPSTLNPDSPNAILNGLEIMKMNNSMGSLSAGTGSVAITSGSSSKKVGMIVGVSVGAFSAVVLAGVFVVLCQKRRRLARQRQSKTWVPLSINDGTSHTMGSKYSNGTTISATSNFEYRVPFLAVQEATNNFDENWVIGIGGFGKVYKGELSDGTKVAVKRGNPRSQQGLAEFRTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMEKGTLKSHLYGSGLPSISWKERLEICIGSARGLHYLHTGYAKAVIHRDVKSANILLDENLMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPSLPREMVNLAEWAMKWQKKGQLEQIIDPTLAGKIRPDSLRKFGETAEKCLADFGVDRPSMGDVLWNLEYALQLQEAVVQGDPEENSTNMIELSPQVNNFNHDASASAVHFEASNVDDLSGVSMSRVFSQLVKSEGR 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4870g00004 836 SUPERFAMILY Protein kinase-like (PK-like) 472 768 IPR011009 -
Gabi4870g00004 836 ProSitePatterns Protein kinases ATP-binding region signature. 503 525 IPR017441 GO:0005524
Gabi4870g00004 836 FunFam receptor-like protein kinase FERONIA 461 572 - -
Gabi4870g00004 836 FunFam Receptor-like protein kinase FERONIA 573 788 - -
Gabi4870g00004 836 ProSiteProfiles Protein kinase domain profile. 497 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4870g00004 836 Gene3D - 31 183 - -
Gabi4870g00004 836 Gene3D - 207 390 - -
Gabi4870g00004 836 Gene3D Transferase(Phosphotransferase) domain 1 573 791 - -
Gabi4870g00004 836 SMART serkin_6 497 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4870g00004 836 FunFam Receptor-like protein kinase FERONIA 208 390 - -
Gabi4870g00004 836 FunFam Putative receptor-like protein kinase 31 184 - -
Gabi4870g00004 836 PANTHER OS07G0166700 PROTEIN 484 774 IPR045272 GO:0004714|GO:0006468
Gabi4870g00004 836 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
Gabi4870g00004 836 Pfam Malectin-like domain 34 388 IPR024788 -
Gabi4870g00004 836 Pfam Protein tyrosine and serine/threonine kinase 502 695 IPR001245 GO:0004672|GO:0006468
Gabi4870g00004 836 CDD STKc_IRAK 503 768 - -
Gabi4870g00004 836 Gene3D Phosphorylase Kinase; domain 1 459 572 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4870g00004 Gabi-Chr4870 18790 22471 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4870g00004 2 836 Receptor kinase-like Gene Family AT3G46290 65.362 0.0 1094
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Gabi4870g00004 Malectin_like 1.6e-39 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4870g00004 - - gmx:100305416 1318.91