Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4857g00003 ATGGCATCTTCTTCAGACTCATGGATAAAGGAATATAATGAAGCAGTGAAACTCACTGATGATATCAGTGGCATGATTTCTGAGCGGAGCTCATTGCCAGCATCTGGACCAGAAACCCAGCGTCATACAGCTGCTATAAGAAGAAAGATCACAATATTAGGGACCAGACTTGATAGCTTGCAATCCACTTCGTCAAGACTCCCTGCGAAGACTGAGAAGGAGATGAATCGTCGAAAGGACATGGTTGCAAATTTGAGGTCGAAAGTTAACCAAATGGCTTCAACATTGAACATGTCAAATTTTGCAAATAGGGATAGTTTGCTTGGGCCAGAAATACAACCAGATGCAATGAGCAGAACTGTTGGCCTGGACAACAATGGACTTGTCGGTCTTCAACGGCAAATTATGAAAGAGCAAGACCAGGGCCTTGAGAAATTGGAGGACACCGTAATAAGTACGAAACATATTGCATTGGCAGTGAATGAAGAGCTGGATCTACACACTAGACTCATTGATGACTTGGACCAACATGTAGATGTTACAGATTCTCGGCTGAGGCGAGTGCAGAAGAACTTGGCAGTTTTAAACAAGCGAACCAAGGGTGGTTGCTCCTGCTTGTGCATGCTTTTATCAGTGGTTGGTATAGTGATTTTGGTGGTTGTCATATGGCTGTTGGTCAAATATTTGTAA 690 0.4319 MASSSDSWIKEYNEAVKLTDDISGMISERSSLPASGPETQRHTAAIRRKITILGTRLDSLQSTSSRLPAKTEKEMNRRKDMVANLRSKVNQMASTLNMSNFANRDSLLGPEIQPDAMSRTVGLDNNGLVGLQRQIMKEQDQGLEKLEDTVISTKHIALAVNEELDLHTRLIDDLDQHVDVTDSRLRRVQKNLAVLNKRTKGGCSCLCMLLSVVGIVILVVVIWLLVKYL 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4857g00003 229 PANTHER SYNTAXIN 39 217 IPR045242 -
Gabi4857g00003 229 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 133 195 IPR000727 -
Gabi4857g00003 229 Pfam SNARE domain 170 221 IPR000727 -
Gabi4857g00003 229 SMART tSNARE_6 128 195 IPR000727 -
Gabi4857g00003 229 CDD SNARE_Qc 136 193 - -
Gabi4857g00003 229 Gene3D - 135 197 - -
Gabi4857g00003 229 SUPERFAMILY SNARE fusion complex 124 194 - -
Gabi4857g00003 229 FunFam syntaxin-51 isoform X2 135 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4857g00003 Gabi-Chr4857 26721 28784 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4857g00003 1 229 SNARE and Associated Proteins AT1G16240 71.552 8.53e-122 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4857g00003 K08503 - gmx:100794038 372.859