Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4856g00008 ATGGAAGACCACTGCGATTCACTTAGTCCATTAGATATCGGTGCAGATAGGTGTGAAGAAGAGTTGAGGCGTCATTCAGCAATGGAGTGCAGACCTGAGATCCATAATTCAGATGAGTATGATGTTGTTCCTACACCACAGGATGGGATGGTATTTAGTTCGGAGGATGAGGTGAGATCGTATTATACAAAATATGCCAACCAAGAAGGTTTTGGTATCATGACAAGAACATCAAAAAAGGTTGGGAATGGTAAGGTTGGATATTTTATACTTGCATGTTCCAGAGAAGGAAATAGAAGAACCAGTAAAAAAAATCCCATCAGAAATTGTCCATCAAGGAAACAGAAGTGTGAAGCCAGGATCAGTGTTTATTTATGTAAAGATGGAGCCTACGGAATTAAATCAGTTACGCTTAATCACAATCATGAATTGAGTCCCGGTCAAGTCAAGTCTAGAAATAATGTTGATATTAACATGAGGTTGAAAAGGACATTAGATCCAAATGATCAAGATGAGGAAAAAGTAAAGAAGAGTTTCCGGTCTCTTGTGGTTGAAGCTAAGGTCCATGAAAATTTGGCAGTTTATGAAAATGGTTTCGGAAATTACATTCAGAAAGAAAAACGACTTATCGGGAAGGATGGAGATGGTTATGCGCTTTATAAGTATTTTATGTGGATGCAAGAACAAGATAGCAATTTTTTTTATGTGATTGACTTTGATGATTGCTTCTGTATGCGGAGTGTTTTTTGGGCTGATGCAAGAAGTAGAGCTGCATACAAATCATTTGGTGATGTGGTGAAATTCGATACTACTTATCTCTCTAATCAATACAAAGTGCCTCTTGCATCCTTTGTTGGAGTTAACCATCATGGACAATCTATACTTTTTGGTATTGGGTTGTTGTCTAGCCAAGACACACAGTCATTTGTTTGGTTGTTTCAGTCCTGGCTAGTTTGCATGTCTGGCATTCCCCCCAAAGGTATCATAACAGATCAATGCAAGCCCATGCAGAATGCAATCGGAGTTGTATTCCCCTCCACTCGACATTCTTGGTGTTCATCAGATATTATGAAAAAGCTTCCTCAGAATATAGGGGGATATGCTGAGTACAAGTCCATAAGTTACCATTTGCAGAATGCTGTATATGACACATTCACTACAAATGAATTTGAAATGGTTTGGAAGAAGATTATGGAGGAATATGGCCTAGAGGACAATAAATGGTTGAAGGATTTGTTCCTTGAAAGACATATCTGGGTTCCTGCCTTTGTAAGATATAGCTTTTGGGCTGGAATGTCTACAACCCAACGTGGCGAAAGTAAGCATGCTTTTTTTGATGGATTCTTAAATGGCCAAACAACTTTGAAACAATTTGTTGATAAATATGATATTGCATTGCAAGCCAAAGCAGAGAGAGAGTTTGAAGCTGATTTCCGTTCAGTTTGTAGCTCTCTTGCATGTGCTACCAAGTCTCCATTTGAGCGGCAGTTCCAATCTGCATACACTCATGCAAAATTTCTAGAGGTTCGGAAAGAATTTGTAGGAAAGGCTGATTGTAATGTTTGTGTTGCCCATGATGAAGGTTCTATTTGTCGCTATAATGTCATTGAAGATGTGATGATGGGGGATAAACCCAAGGAAGCCATGTTTGAAGTCACATTTGACAGGGTTAACTGTGATGTAAAGTGTATGTGCAATATGTTTGACTGTAGAGGTATACTTTGTAGGCACTCACTTGCTATACTCTCTCATGAGAGAGTAAAGGACATCCCTTGTAAATATATCTTGGATAGATGGAGGAAAGATTTAAAGAGGAGGCACACATATGCAAAGACCAGCTACGCTGCTAAGCAGCTTCAACCTCAGATGCAAAGGTTTGATTTATTGTGCAAGCAATTTGATAGTGTTGCTGAAGTTGCTTCTGAATTTGAGGAAACAAGTTCTTTTGTAAAGAATTGCATCTGTGACTTGAAAGAGAAGTTGGAAGCATGGACAACCCGTTTGAGAAACTCATCAGAGGTGGCAGTACCTATAAGCTGTGCAATTGAAAGTTACATGAATGACTAG 2067 0.389 MEDHCDSLSPLDIGADRCEEELRRHSAMECRPEIHNSDEYDVVPTPQDGMVFSSEDEVRSYYTKYANQEGFGIMTRTSKKVGNGKVGYFILACSREGNRRTSKKNPIRNCPSRKQKCEARISVYLCKDGAYGIKSVTLNHNHELSPGQVKSRNNVDINMRLKRTLDPNDQDEEKVKKSFRSLVVEAKVHENLAVYENGFGNYIQKEKRLIGKDGDGYALYKYFMWMQEQDSNFFYVIDFDDCFCMRSVFWADARSRAAYKSFGDVVKFDTTYLSNQYKVPLASFVGVNHHGQSILFGIGLLSSQDTQSFVWLFQSWLVCMSGIPPKGIITDQCKPMQNAIGVVFPSTRHSWCSSDIMKKLPQNIGGYAEYKSISYHLQNAVYDTFTTNEFEMVWKKIMEEYGLEDNKWLKDLFLERHIWVPAFVRYSFWAGMSTTQRGESKHAFFDGFLNGQTTLKQFVDKYDIALQAKAEREFEADFRSVCSSLACATKSPFERQFQSAYTHAKFLEVRKEFVGKADCNVCVAHDEGSICRYNVIEDVMMGDKPKEAMFEVTFDRVNCDVKCMCNMFDCRGILCRHSLAILSHERVKDIPCKYILDRWRKDLKRRHTYAKTSYAAKQLQPQMQRFDLLCKQFDSVAEVASEFEETSSFVKNCICDLKEKLEAWTTRLRNSSEVAVPISCAIESYMND 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4856g00008 688 Pfam MULE transposase domain 265 359 IPR018289 -
Gabi4856g00008 688 SMART 26again6 561 588 IPR006564 GO:0008270
Gabi4856g00008 688 ProSiteProfiles Zinc finger SWIM-type profile. 550 586 IPR007527 GO:0008270
Gabi4856g00008 688 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 35 663 IPR031052 GO:0006355
Gabi4856g00008 688 Pfam FAR1 DNA-binding domain 60 145 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4856g00008 Gabi-Chr4856 103974 107153 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gabi4856g00008 MULE 2e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4856g00008 - K17604 gmx:102660547 799.66