Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4855g00002 ATGGCTGAATCCACCGCGAACAAGCAGAGCAATAACGGAGCACAAGGAAACGAAGAACAAGAAGATGACTACATGGGTGACCTTTCTCAGTTTCTTCCTTCAGAGGCTTCTGACCCTCCAAAGTCTTCATCCAAAAAGATCTCTAACAAGAAAGATCCTTTAGTCAACTCTTCCAAGAATCAGTTGAAAACTCTTAACTGGCAAGAACGGCGAAAACTTGAAAGAGAAAGAAAACAACAAGAGGAGGATGAGCAAACATTAGCAAAAGTGGAAGCACCAATACCGCAATCCAACATTGGGTTTAAGATGCTCAAACAGATGGGTTATACTCCTGGTTCTGCCCTTGGCAAGCAGAGCTCAGGCAGGGCTGAACCAGTGGGGATTGAAATTCGACGGTCACGAGCTGGTATAGGCTTAGATGATCCCCACAAGGAGAAGAGAAAAAAGGAAGAAATCATGATCAACAGGAAACGGAGGAAAGAGGAGGCCCTAATGGAAGAATTTGGGTCTATGCAGAAGTCAAGGTGGCAGAGTAGGAGAGTTGTAATTAATTTCAATAAGGCAAAGGCTGCCCTTGACCAATTGGAGAATAGGGAAATTGTGGAGCCACAAAAGAATGAGGATGATGCAGAGGGTGAAGATGAAGAAGAGGAAGAAATAACGGAAGAGGACTTGCACGAACTTTTGATGAAACTGAGGGATGAGTTTAATTATTGCCTCTTTTGTGGATGCAGATACGAATCAAAGGATGCTCTTTTGGCCAACTGCCCTGGAACCAATGAAGATGACCACTAA 795 0.439 MAESTANKQSNNGAQGNEEQEDDYMGDLSQFLPSEASDPPKSSSKKISNKKDPLVNSSKNQLKTLNWQERRKLERERKQQEEDEQTLAKVEAPIPQSNIGFKMLKQMGYTPGSALGKQSSGRAEPVGIEIRRSRAGIGLDDPHKEKRKKEEIMINRKRRKEEALMEEFGSMQKSRWQSRRVVINFNKAKAALDQLENREIVEPQKNEDDAEGEDEEEEEITEEDLHELLMKLRDEFNYCLFCGCRYESKDALLANCPGTNEDDH 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4855g00002 264 MobiDBLite consensus disorder prediction 134 153 - -
Gabi4855g00002 264 Pfam G-patch domain 96 139 IPR000467 GO:0003676
Gabi4855g00002 264 MobiDBLite consensus disorder prediction 65 88 - -
Gabi4855g00002 264 MobiDBLite consensus disorder prediction 35 64 - -
Gabi4855g00002 264 PANTHER UNCHARACTERIZED 18 264 IPR039249 -
Gabi4855g00002 264 MobiDBLite consensus disorder prediction 206 223 - -
Gabi4855g00002 264 SMART G-patch_5 94 140 IPR000467 GO:0003676
Gabi4855g00002 264 SMART DUF4187_2 210 264 IPR025239 -
Gabi4855g00002 264 ProSiteProfiles G-patch domain profile. 96 142 IPR000467 GO:0003676
Gabi4855g00002 264 MobiDBLite consensus disorder prediction 1 95 - -
Gabi4855g00002 264 MobiDBLite consensus disorder prediction 194 224 - -
Gabi4855g00002 264 Coils Coil 147 167 - -
Gabi4855g00002 264 Pfam Domain of unknown function (DUF4187) 213 264 IPR025239 -
Gabi4855g00002 264 Coils Coil 70 90 - -
Gabi4855g00002 264 MobiDBLite consensus disorder prediction 1 18 - -
Gabi4855g00002 264 MobiDBLite consensus disorder prediction 133 153 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4855g00002 88 138 C2H2 Transcription Factor Family AT5G26610 43.137 5.73e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4855g00002 - - gmx:100777380 396.356