Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4855g00001 ATGATTATTGATGATGTAATTTCCATTAAACCATATTGTGACTCCCTGGATTGTTTGGTTGTTGGTCACCACGTTGATACTGAGTTGGTATTAGAGGACTTTACCGATACAGATTTGATGGCTCTTATTTCTTGTTCAAGGAAAGAGTTCAAACCCACCGATGATGAACTCATCCAGTTGTTTCTTTACAACAAGGTCAATGGGAAACCATTGCCTAGAGATGTTACTATTCTTGAATATGATTTATATGGTGAAAAGAACCCTTGGGAGATTTGGGAAGCCTTTGGAGATTCTAACTCTTACGGTGGAACTGACATTTACTTCTTCACCACCTTAAAGAAAAAATTCTCCAGTGGCACACGCTCTGTTCGTACCATTGGGTGTGGTTCTTGGGAAGCTGAAGACAAGGGAAAAAAGGTTATGGCCAATGGCACAATGCAATGTATTGGGATAAGGAGACGTTTACGATTTGAGAAAAATGGCACCAACCATGATGGTGCTTGGATCTTGCATGAATACAGACTTGATTCTTCATTGTTACACAATGGATCTGCCGACAACTATGTTCTATGTAGATTCAGAAAGAATTTAAGACATGATCTTCACAAAAAGCAGGGAGTGAAAAGAATTAGACAAAAAGATTTCACTGTGAAGCAAACGAGAAAGACGGTTGTTCTTGAACTTGAAGCTCCTACCACACATGTCGACAGGACGAATGAGGTGGAGATTTCCAAGAGAACTGAGTTGGTATATAAGGAAAAAGAAGATGATGGTCTCACCATGACTTGGCCACATTTATTTTCGATGCAGATGAGAGAGGCTAATGGAGTCTTAGTCCAAGAAGAAGAGATCCAAATGCTTCCTAATACATTTTATAATGAATTTTTATTGGAGAGGTTATCGTTATCCTACTTATGA 918 0.3889 MIIDDVISIKPYCDSLDCLVVGHHVDTELVLEDFTDTDLMALISCSRKEFKPTDDELIQLFLYNKVNGKPLPRDVTILEYDLYGEKNPWEIWEAFGDSNSYGGTDIYFFTTLKKKFSSGTRSVRTIGCGSWEAEDKGKKVMANGTMQCIGIRRRLRFEKNGTNHDGAWILHEYRLDSSLLHNGSADNYVLCRFRKNLRHDLHKKQGVKRIRQKDFTVKQTRKTVVLELEAPTTHVDRTNEVEISKRTELVYKEKEDDGLTMTWPHLFSMQMREANGVLVQEEEIQMLPNTFYNEFLLERLSLSYL 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4855g00001 305 Pfam No apical meristem (NAM) protein 49 175 IPR003441 GO:0003677|GO:0006355
Gabi4855g00001 305 ProSiteProfiles NAC domain profile. 44 196 IPR003441 GO:0003677|GO:0006355
Gabi4855g00001 305 SUPERFAMILY NAC domain 50 194 IPR036093 GO:0003677|GO:0006355
Gabi4855g00001 305 PANTHER NAC TRANSCRIPTION FACTOR 56 49 216 - -
Gabi4855g00001 305 Gene3D NAC domain 53 201 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4855g00001 Gabi-Chr4855 8746 19129 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4855g00001 50 215 NAC Transcription Factor Family AT1G77450 33.526 9.75e-20 84.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gabi4855g00001 NAM 1.6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4855g00001 - - mtr:11433340 246.128