Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4851g00005 ATGAAAGGTCATATGTCTTCATTGGTCATGCCTAACCAATGTAGCTTTGTAAAAGGGAGGCTTAGTGCTGACATCATCATAATAGCTCAAGAGATGATACATTCTATGAGGAGCAAGAAAGGAAAGAAAGGTTGGATGATTCCTTTGTGGGCTAGAGTTCTTAAGAGCAAGTGCAAAATGGAGGACAAGATTATCCTGAAACTATTGCCCTCACTTCTCCTTCCATCTCCATTTTGTGTGTACCTGCAACTACCTCTCATGGACACATTCAGTTGCATACTGTTCTTTCTTTTCACCTACATCTTTGTTCAAGTGCTTCATTCCCTATTTAGCAACAAATCAAATCACAAGCTTCCACCAGGACCAGTTGGTGTTCCCATCTTTGGAAACCTCCTTCAACTAGGAAAAAAGCCCCACCAAACATTGACATGTCTTGCCAACATTCATGGTCCAATCATGAGTTTGAAGCTAGGCCAAGTTACCACAATAGTCATGTCTTCATCTGATATGGCCAAACAAGTGCTCCAAACCCATGATCAGTTCTTGGCAAACAGAAAGGTTCCTGATGCAATGAGAGGTGCTAACCATGACAAATACAGCTTACCCTTCTTGCCAATTTCACATCAATGGAGAGTCCTTAGGAAAAGTTGCAATGGTCTGTTATTCTCCAACAAGAATCTAGATGCTACTGAAGAACTTAGGCGTGAGAAGATTCAAGAACTTTTCAATGACATTCACCAACACAGCTTAGTTGGTGAAGCTGTAGATATTGGAAGGTTAGCTTTCAAAACCACAATTAATTTGTTGTCAAACACAATTTACTCGATGGATTTTGTTCACTCTGCGAGTAAAGCTGGTGAGTTCAAGGAGTTAGTGGGGAATATCTTGAAAGAGATTGGAAGACCAAACTTGGCTGATTGTTTTCCTGTGTTGAAGATGGTTGATCCTCATGGCATCAGGAGGCGCACTAGTAATTGCTTTGTGAAGTTGTTGACCATCTTCAAGCACTTGATTAACCATAGATTGAAGATAAGGAAAGACACTGGTTACTGCACCAAAAATGACATGTTAGATGCCATGCTTGACAATGCTGAAGAGAATAGTCGTGACATGTACACAACTAAGATGGAACGTTTATCATTGGACTTGTTTGTGGCAGGAACCGACACAATTACATCTACTGTAGAATGGGCAATGGCTGAGTTACTTCGCAACCCAAATATTATGTCAAAAGCAAAAGAAGAACTAGAGCAAACAATTGGCAAAGGTAACCTAGTTGGAGAATCAGACATTACTAGACTCCCTTACTTGCAAGCAATAGTAAAAGAGACTTTCAGGTTGCACCCAGCAGTTCCACTATTGCTCCCTAGAAAAGCCGAAATAGATGTAGAGATGCACAACTATACAGTCCCAAAGGGTGCACAAGTGCTAGTTAATGTGTGGGCTATTGGCAGGGACCCAAATTTGTGGGAAAATCCAAATTTATTTTCACCAGAGAGGTTCTTGGGGTCAGAAATTGACTTCAAAGGACGAAGTTTTGAGCTGACACCATTTGGTGCTGGAAGGAGAATATGTCCTGGCTTGCCATTGGCAATGAGGATGTTGTTCTTGATCTTGGGTTTGCTTATCAACTCCTTTGATTGGAAGCTTGAAGGTGGAATTAAACCACAGGATATGGATATGGATGAAAAATTTGGACTTACCTTAGAAAAGGCTCAACCTGTGCTAGCTATTCCAATCAAAGTTACTAGTTATTAA 1758 0.4073 MKGHMSSLVMPNQCSFVKGRLSADIIIIAQEMIHSMRSKKGKKGWMIPLWARVLKSKCKMEDKIILKLLPSLLLPSPFCVYLQLPLMDTFSCILFFLFTYIFVQVLHSLFSNKSNHKLPPGPVGVPIFGNLLQLGKKPHQTLTCLANIHGPIMSLKLGQVTTIVMSSSDMAKQVLQTHDQFLANRKVPDAMRGANHDKYSLPFLPISHQWRVLRKSCNGLLFSNKNLDATEELRREKIQELFNDIHQHSLVGEAVDIGRLAFKTTINLLSNTIYSMDFVHSASKAGEFKELVGNILKEIGRPNLADCFPVLKMVDPHGIRRRTSNCFVKLLTIFKHLINHRLKIRKDTGYCTKNDMLDAMLDNAEENSRDMYTTKMERLSLDLFVAGTDTITSTVEWAMAELLRNPNIMSKAKEELEQTIGKGNLVGESDITRLPYLQAIVKETFRLHPAVPLLLPRKAEIDVEMHNYTVPKGAQVLVNVWAIGRDPNLWENPNLFSPERFLGSEIDFKGRSFELTPFGAGRRICPGLPLAMRMLFLILGLLINSFDWKLEGGIKPQDMDMDEKFGLTLEKAQPVLAIPIKVTSY 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4851g00005 585 Gene3D Cytochrome P450 107 578 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4851g00005 585 PRINTS E-class P450 group I signature 146 165 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4851g00005 585 PRINTS E-class P450 group I signature 264 282 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4851g00005 585 PRINTS E-class P450 group I signature 395 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4851g00005 585 PRINTS E-class P450 group I signature 438 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4851g00005 585 PRINTS E-class P450 group I signature 479 503 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4851g00005 585 PRINTS E-class P450 group I signature 525 548 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4851g00005 585 PRINTS E-class P450 group I signature 375 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4851g00005 585 PRINTS E-class P450 group I signature 515 525 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4851g00005 585 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 97 581 - -
Gabi4851g00005 585 FunFam Cytochrome P450 76C4 110 578 - -
Gabi4851g00005 585 Pfam Cytochrome P450 119 570 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4851g00005 585 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 518 527 IPR017972 GO:0005506|GO:0016705
Gabi4851g00005 585 PRINTS P450 superfamily signature 386 403 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4851g00005 585 PRINTS P450 superfamily signature 525 536 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4851g00005 585 PRINTS P450 superfamily signature 439 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4851g00005 585 PRINTS P450 superfamily signature 516 525 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4851g00005 585 CDD CYP76-like 146 579 - -
Gabi4851g00005 585 SUPERFAMILY Cytochrome P450 119 578 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4851g00005 Gabi-Chr4851 104727 111683 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4851g00005 94 581 Cytochrome P450 AT2G45550 46.386 1.18e-160 467
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4851g00005 - - lja:Lj2g3v0039250.1 686.026