Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4839g00012 ATGACTAATAATGCAAATGTTGCTTCATTTGAGGCATTTCTCCAAGGTTGGATGTTGCGCCAAAGAGACTACCTTGACGAGCTTATCTCAACTCAGCAACAACATCACGAGATTCAAGATGATGCTGATAGGAGACAATTGATAAACAGGGTCCTCTGCCACTATGGGCAATACTATGAAGAGAAATCAAGGATTGCCCACCAAAATGTTCTGCTTGTTTTCTCACCACCATGGTTCAGTTCATTGGAAAGAACGTTTCTTTGGGTGGCGGGGTTCAAGCCCGGAATGGCTTTTCAGGTTGTGAACATGGCTTTGGAGGACTTGTCAGAAGAGCAGAGGCAGAGGTTGAGTCAGCTCAATGAAGAGACCAAGATGGAGGAGAGAGGCCTCAATGACGAGTTGGCAAAGGTTCAAGAGAGTTTTGCAGCGCCACCGTTGTTGGACATGGCCAGAAGCCATGGCAGGGTGTGTTTGAGTAGGTCCTTCATGGAAGAGGAAGGTTCAGTTCCAAGCAATTTCAAGGAGACATTGGAGAATCTTGTTACAAATGCTGATGCTTTGAGGAGAAACACAGCTTTGAAAGTTGTGAAGATACTGACATTAGATCAGGTTGTAACCTTCTTGGTTGCTGTTGCTGAGCTTCAACTCAGGATCAGGTCTTGGGGTTTGGATAAGGATTCCAGGAATGAAGGCCAAGGATGA 702 0.4558 MTNNANVASFEAFLQGWMLRQRDYLDELISTQQQHHEIQDDADRRQLINRVLCHYGQYYEEKSRIAHQNVLLVFSPPWFSSLERTFLWVAGFKPGMAFQVVNMALEDLSEEQRQRLSQLNEETKMEERGLNDELAKVQESFAAPPLLDMARSHGRVCLSRSFMEEEGSVPSNFKETLENLVTNADALRRNTALKVVKILTLDQVVTFLVAVAELQLRIRSWGLDKDSRNEGQG 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4839g00012 233 ProSiteProfiles DOG1 domain profile. 7 228 IPR025422 GO:0006351|GO:0043565
Gabi4839g00012 233 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 9 230 - -
Gabi4839g00012 233 Pfam Seed dormancy control 25 101 IPR025422 GO:0006351|GO:0043565
Gabi4839g00012 233 Coils Coil 102 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4839g00012 Gabi-Chr4839 110865 112188 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4839g00012 4 220 Calmodulin-binding Proteins AT1G77920 29.493 8.60e-22 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4839g00012 - - gmx:100780874 369.007