Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4837g00003 ATGGGCAGAGTCATAAGGGCACAATTGGGTGAGTTTTTTTTTTGGAACATTCTCAATGTCTATGGCGCCTTCAAGAGTGATTTCTCTTCTTTGTCTCCTTGTTATACTCATATCATATCTCATACCACCGCCCAGCCAAACTTCCTTTTCCATTTTTGCACGAATGATAAAGGCAACTACACTGAAAATAGTACCTACCAGACCAACCTCAATGCTCTTTTGTCCAGTTTATCTTCCAACACACAAATTGATTATGGCTTCTACGATTCCTCTGAGGGTCAAGACTCTGACAAAGTAAATGCAATTGGGATGTGTAGAGGAGATATTAAGCCAGATGCATGCCGCAGTTGCCTCAATGATTCAAGAGTCCTTCTCACGCAGCTTTGTCCAAACCAGAAAGAGGCCATTGGTTGGTATGACAATTGCATGCTGCGCTTCTCAAACCGTTCAATATTTGGTATTATGGAACCTGATCCTGCGTACTCTCTGTGGGTCCAAAATAATGCAACTGATATTGATCAGTTTAATCAAGTGCTTATGGACTTGGTGGACAGCCTGAGAAGCAAAGCTGCATCCGGTGATTCCCTTAAAAAGTATGCTGCAGGAAGCGCAATAGGTCAAAGCTTTCAAACTATATTTTTTCTTCTACAATGCACACCTGATTTATCAGAGCAACAGTGCAATGATTGCTTGGTTAGAACTATCTCAGAAATCTCAACTTGTTGTGCTGGCAAGACTGCTGGCAGAATTGGAAGACCAAGCTGCAATCTTAGATTTGATACATCTCCCTTCTATGACTCTACAGCCGATGCCTCTCCACCACAAGTGCCTCCTTCTCCTTCTCCTCCCCCTCCTTCAGTCAACAATACCACTTCCACAGGAGGAAAGAGCAGCACAACACGAACTGTCATTGCGGTAGTTGTGCCAATTGTAGCTGTCGTTACACTCCTCATCTCTCTGTGCATCTTCTTAAGAGCAAGAAAGAAAAGGAAAAATATTGGCATGGACACTGAAGTTGACAATGAGATTGAACCTACTGAGACATTGCAATTCAACTTTAACACCATAAGAATAGCTACAAATAACTTTTCTGAGACAAATATGCTAGGGCGAGGAGGATTTGGACCTGTTTATCAGGGTAAGGTTTCCAATGGACAAGAAGTTGCTGTTAAAAGGTTGTCAATGAATTCAGGCCAAGGAGATACAGAATTTAAGAATGAAGTGCAGTTAGTGGCCAAGCTTCAACACCGAAATTTAGTCAGGTTACTTGGTTTCAGTTTGGAAAGAAATGAAAGGCTACTGATCTATGAGTTTGTTCCCAATAAAAGCCTTGATTACTTCAGATTTGATCCAATTAAGCGTGCACATTTAGATTGGGAAAGGCAGTATAAAATCATAGGAGGCATTGCCAGAGGCCTTCTTTACCTTCATGAGGATTCGAGACTGCGAATTATTCATCGTGATCTCAAAGCAAGCAACATTCTCTTAGATGAAGAGATGAACCCCAAGATATCAGATTTTGGCATGGCAAGATTGTCTGTTGTGGATCAAACTCAAGGAAATACAAGTAGAATTGTTGGAACTTATGGATATATGGCACCTGAGTATGTAAGGCAAGGACAATTCTCTGTGGTGAAGTAAGATGTCTTCAGTTTTGGCGTACTGGTTCTAGAGATAGTAAGTGGCCAGAAATATAGTGGCTTCCGTAATGGAGAAGATGTAGAGGATCTAATAAGCTTTGCCTGGAAAAAATGGAGGGAGGGAACAGCATTAAGTTTCGTAGATTCCAATATAAATAAAGGTTCAAAAAATGAAATTATGAGATGCATCCACATTGGTTTACTGTGTGTTCAGGAAAATTTAGCTGACAGACCAACCATGGCTTCTATTGTACTCATGCTTAATAGCTACTCTCTCACTCTCCCAGTACCTTCAGAGCCAGCATTTTTTATGCACAGCAGAGGTTTGTCAGATATTCAGTCATGGGAGTATAACGCAGGGGCAACAGAGTCAAGCAAATCTGTTAAAGCTTACTCAAGTGAGTGTTGGGAGGACGATATTTGA 2064 0.4118 MGRVIRAQLGEFFFWNILNVYGAFKSDFSSLSPCYTHIISHTTAQPNFLFHFCTNDKGNYTENSTYQTNLNALLSSLSSNTQIDYGFYDSSEGQDSDKVNAIGMCRGDIKPDACRSCLNDSRVLLTQLCPNQKEAIGWYDNCMLRFSNRSIFGIMEPDPAYSLWVQNNATDIDQFNQVLMDLVDSLRSKAASGDSLKKYAAGSAIGQSFQTIFFLLQCTPDLSEQQCNDCLVRTISEISTCCAGKTAGRIGRPSCNLRFDTSPFYDSTADASPPQVPPSPSPPPPSVNNTTSTGGKSSTTRTVIAVVVPIVAVVTLLISLCIFLRARKKRKNIGMDTEVDNEIEPTETLQFNFNTIRIATNNFSETNMLGRGGFGPVYQGKVSNGQEVAVKRLSMNSGQGDTEFKNEVQLVAKLQHRNLVRLLGFSLERNERLLIYEFVPNKSLDYFRFDPIKRAHLDWERQYKIIGGIARGLLYLHEDSRLRIIHRDLKASNILLDEEMNPKISDFGMARLSVVDQTQGNTSRIVGTYGYMAPEYVRQGQFSVVKXDVFSFGVLVLEIVSGQKYSGFRNGEDVEDLISFAWKKWREGTALSFVDSNINKGSKNEIMRCIHIGLLCVQENLADRPTMASIVLMLNSYSLTLPVPSEPAFFMHSRGLSDIQSWEYNAGATESSKSVKAYSSECWEDDI 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4837g00003 687 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 46 151 - -
Gabi4837g00003 687 MobiDBLite consensus disorder prediction 273 287 - -
Gabi4837g00003 687 ProSiteProfiles Protein kinase domain profile. 363 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4837g00003 687 Gene3D - 45 150 IPR038408 -
Gabi4837g00003 687 Gene3D - 158 264 IPR038408 -
Gabi4837g00003 687 FunFam Cysteine-rich receptor-like protein kinase 10 325 438 - -
Gabi4837g00003 687 SUPERFAMILY Protein kinase-like (PK-like) 348 663 IPR011009 -
Gabi4837g00003 687 CDD STKc_IRAK 369 635 - -
Gabi4837g00003 687 FunFam Cysteine-rich receptor-like protein kinase 10 159 264 - -
Gabi4837g00003 687 Gene3D Transferase(Phosphotransferase) domain 1 440 641 - -
Gabi4837g00003 687 ProSiteProfiles Gnk2-homologous domain profile. 48 151 IPR002902 -
Gabi4837g00003 687 Gene3D Phosphorylase Kinase; domain 1 337 438 - -
Gabi4837g00003 687 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 67 665 - -
Gabi4837g00003 687 FunFam cysteine-rich receptor-like protein kinase 10 439 641 - -
Gabi4837g00003 687 Pfam Salt stress response/antifungal 168 261 IPR002902 -
Gabi4837g00003 687 Pfam Salt stress response/antifungal 53 148 IPR002902 -
Gabi4837g00003 687 MobiDBLite consensus disorder prediction 266 295 - -
Gabi4837g00003 687 ProSitePatterns Serine/Threonine protein kinases active-site signature. 484 496 IPR008271 GO:0004672|GO:0006468
Gabi4837g00003 687 SMART serkin_6 363 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4837g00003 687 Pfam Protein kinase domain 364 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4837g00003 687 ProSiteProfiles Gnk2-homologous domain profile. 157 264 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4837g00003 Gabi-Chr4837 62785 67100 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4837g00003 56 653 Receptor kinase-like Gene Family AT4G21410 52.769 0.0 615
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gabi4837g00003 Pkinase 3.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4837g00003 - - gmx:102662291 1029.24