Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4832g00001 ATGAACAACCCTGCAGATAAAAGGGAGCAGTGTCAGAAGAAGAGAAAATCTACAAGCTGGGAAGCCTCTTCCTCTTCAAGGAGAAGATTCTGCAGCAACAAAAGTGAAGTCTCCACCATACTGAAGCTTTACGATGACCCGTGGACGATCAAGAAGACACTTACTGTCAGTGATCTTGGAATCTTGAGCAGACTCTTGTTGGGTTCATATTTGGTCAAAAAGCAGATTTTGCCTATGTTGGATGTTGATCATGCAAGAGCCGCGGAAACTGAGCAAGGAACCCCAGTTAGAGTTCGGGACATAGACACCAATTCCATGCACCCACTCGTTCTGAAGCGATGGTCTTCATCTAAGAGCTATGTTCTCATTGGAAAGTGGAAACAAGATTTTGTAAGAAGAAGAGAGCTCATGAAAGGGGATGAGATTGGATTCCAATGGGACCCATATAATTGCATTTTCAATTTCTGTATTCTTAAACGGGCTATGCGGGTAACTCAATCAAAGTGTTAG 510 0.4314 MNNPADKREQCQKKRKSTSWEASSSSRRRFCSNKSEVSTILKLYDDPWTIKKTLTVSDLGILSRLLLGSYLVKKQILPMLDVDHARAAETEQGTPVRVRDIDTNSMHPLVLKRWSSSKSYVLIGKWKQDFVRRRELMKGDEIGFQWDPYNCIFNFCILKRAMRVTQSKC 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4832g00001 169 SUPERFAMILY DNA-binding pseudobarrel domain 45 158 IPR015300 -
Gabi4832g00001 169 Gene3D - 45 167 IPR015300 -
Gabi4832g00001 169 MobiDBLite consensus disorder prediction 1 22 - -
Gabi4832g00001 169 CDD B3_DNA 48 159 IPR003340 GO:0003677
Gabi4832g00001 169 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 10 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4832g00001 Gabi-Chr4832 12234 12758 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4832g00001 15 145 B3 DNA Binding Superfamily AT1G25560 27.143 5.55e-06 43.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4832g00001 - - pvu:PHAVU_009G204600g 255.758