Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4826g00006 ATGCTTCATGCATTGATGAATCTTATCTCTCAATGTTGGAAGCCGTTCGGGCGCGGTGATGAATCTTCTTCAGCAGGCATTGTCGGAAGAGAAGGCAAAGACGGATTGCTCTGGTTCAAAGACATCGGAAAATATGGCTCTGGCGATTTCTCCATGGCGGTGGTTCAGGCCAACCACGTCCTCGAAGACCAGAGCCAGATCGAGTCTGGTCCTCTCGGCACCTTCGTCGGCATTTACGACGGCCACGGAGGCCCCGATGCAGCGCGTTACGTTTGCGATCACTTGTTCCGCAATTTCCGAGGTTTTTTTATTCCTGAGTCACGTGGAGTTGTGACGACTGAGACTATTGAAACAGCATTTCGCCGAACAGAAGAGGGGTTCACCGCCCTTGTTTCAGAATTATGGAGTACTCGACCTCAAGTTGCAACTACTGGATCGTGTTGTCTGGTTGGAGTTATTTATCAGCAGACACTATTTGTGGCAAATGTTGGGGATTCTCGCCTTGTGTTGGGTAGGAAAGTTGGCAACACCGGTGGGGTTGCTTCGATTCAGCTTTCTACGGAACACAATGCAAATATTGAGGCTGTTAGACAGGAACTTAAAGAATTACACCCTGATGATCCCCAAATTGTTGTTCTCAAACATGGAGTGTGGAAAGTAAAAGGCATTATTCAGGTTTCTAGATCCATAGGCGACGTATATATGAAACATGCGCGGTTTAACCGGGAACCAATTAATGCAAAATTCAGACTTCCTGAACCAATGAACATGCCTATCTTGTCTGCTAATCCAACTATTATTTCCCATCCTCTCCAACCAAATGATTCCTTCCTTATATTTGCATCAGATGGTTTATGGGAGCACCTGAGTAATGAAAGAGCGGTGGAGATTGTTCACAGCAATCCACGCGTGGGTAGTGCCAAGAGACTTGTAAAGGCTGCCCTACACGAAGCTGCAAGAAAACGTGAAATGCGATATTCAGACCTTCATAAGATTGACAAGAAGGTTCGACGCCATTTTCATGACGATATAACTGTTATTGTTTTATTCTTAAATCACGACCTTATATCCAGAGGCACAGTTCTAAACCCGCCACTCTCAATTCGAAGTGCTCTCGATCACTGA 1125 0.4578 MLHALMNLISQCWKPFGRGDESSSAGIVGREGKDGLLWFKDIGKYGSGDFSMAVVQANHVLEDQSQIESGPLGTFVGIYDGHGGPDAARYVCDHLFRNFRGFFIPESRGVVTTETIETAFRRTEEGFTALVSELWSTRPQVATTGSCCLVGVIYQQTLFVANVGDSRLVLGRKVGNTGGVASIQLSTEHNANIEAVRQELKELHPDDPQIVVLKHGVWKVKGIIQVSRSIGDVYMKHARFNREPINAKFRLPEPMNMPILSANPTIISHPLQPNDSFLIFASDGLWEHLSNERAVEIVHSNPRVGSAKRLVKAALHEAARKREMRYSDLHKIDKKVRRHFHDDITVIVLFLNHDLISRGTVLNPPLSIRSALDH 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4826g00006 374 Gene3D - 40 359 IPR036457 -
Gabi4826g00006 374 FunFam Probable protein phosphatase 2C 42 40 359 - -
Gabi4826g00006 374 ProSitePatterns PPM-type phosphatase domain signature. 75 83 IPR000222 GO:0043169
Gabi4826g00006 374 SMART PP2C_4 43 349 IPR001932 -
Gabi4826g00006 374 ProSiteProfiles PPM-type phosphatase domain profile. 49 351 IPR001932 -
Gabi4826g00006 374 PANTHER PROTEIN PHOSPHATASE 47 349 IPR015655 GO:0004722|GO:0006470
Gabi4826g00006 374 CDD PP2Cc 50 351 IPR001932 -
Gabi4826g00006 374 Pfam Protein phosphatase 2C 59 321 IPR001932 -
Gabi4826g00006 374 SUPERFAMILY PP2C-like 58 352 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4826g00006 Gabi-Chr4826 107198 112918 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4826g00006 1 371 PP2C-type Phosphatase Gene Family AT4G38520 57.895 4.15e-157 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4826g00006 K01102 - gmx:100790813 647.121