Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4826g00005 ATGCTTCATGCATTGATGAATCTTATCTCTCAATGTTGGAAGCCGTTCGGGCGCGGTGATGAATCTTCTTCAGCAGGCATTGTCGGAAGAGAAGGCAAAGACGGATTGCTCTGGTTCAAAGACATCGGAAAATATGGCTCTGGCGATTTCTCCATGGCGGTGGTTCAGGCCAACCACGTCCTCGAAGACCAGAGCCAGATCGAGTCTGGTCCTCTCGGCACCTTCGTCGGCATTTACGACGGCCACGGAGGCCCCGATGCAGCGCGTTACGTTTGCGATCACTTGTTCCGCAATTTCCGAGCTGTTTTGAACTTTCATTTTTATGCAGCAATATCGGCTGAGTCACGTGGAGTTGTGACGACTGAGACTATTGAAACAGCATTTCGCCGAACAGAAGAGGGGTTCACCGCCCTTGTTTCAGAATTATGGAGTACTCGACCTCAAGTTGCAACTACTGGATCGTGTTGTCTGGTTGGAGTTATTTATCAGCAGACACTATTTGTGGCAAATGTTGGGGATTCTCGCCTTGTGTTGGGTAGGAAAGTTGGCAACACCGGTGGGGTTGCTTCGATTCAGCTTTCTACGGAACACAATGCAAATATTGAGGCTGTTAGACAGGAACTTAAAGAATTACACCCTGATGATCCCCAAATTGTTGTTCTCAAACATGGAGTGTGGAAAGTAAAAGGCATTATTCAGGTTTCTAGATCCATAGGCGACGTATATATGAAACATGCGCGGTTTAACCGGGAACCAATTAATGCAAAATTCAGACTTCCTGAACCAATGAACATGCCTATCTTGTCTGCTAATCCAACTATTATTTCCCATCCTCTCCAACCAAATGATTCCTTCCTTATATTTGCATCAGATGGTTTATGGGAGCACCTGAGTAATGAAAGAGCGGTGGAGATTGTTCACAGCAATCCACGCGTGGGTAGTGCCAAGAGACTTGTAAAGGCTGCCCTACACGAAGCTGCAAGAAAACGTGAAATGCGATATTCAGACCTTCATAAGATTGACAAGAAGGTTCGACGCCATTTTCATGACGATATAACTGTTATTGTTTTATTCTTAAATCACGACCTTATATCCAGAGGCACAGTTCTAAACCCGCCACTCTCAATTCGAAGTGCTCTCGATCACTGA 1149 0.4569 MLHALMNLISQCWKPFGRGDESSSAGIVGREGKDGLLWFKDIGKYGSGDFSMAVVQANHVLEDQSQIESGPLGTFVGIYDGHGGPDAARYVCDHLFRNFRAVLNFHFYAAISAESRGVVTTETIETAFRRTEEGFTALVSELWSTRPQVATTGSCCLVGVIYQQTLFVANVGDSRLVLGRKVGNTGGVASIQLSTEHNANIEAVRQELKELHPDDPQIVVLKHGVWKVKGIIQVSRSIGDVYMKHARFNREPINAKFRLPEPMNMPILSANPTIISHPLQPNDSFLIFASDGLWEHLSNERAVEIVHSNPRVGSAKRLVKAALHEAARKREMRYSDLHKIDKKVRRHFHDDITVIVLFLNHDLISRGTVLNPPLSIRSALDH 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4826g00005 382 SUPERFAMILY PP2C-like 58 360 IPR036457 -
Gabi4826g00005 382 FunFam Probable protein phosphatase 2C 42 40 367 - -
Gabi4826g00005 382 PANTHER PROTEIN PHOSPHATASE 47 357 IPR015655 GO:0004722|GO:0006470
Gabi4826g00005 382 SMART PP2C_4 43 357 IPR001932 -
Gabi4826g00005 382 CDD PP2Cc 50 359 IPR001932 -
Gabi4826g00005 382 ProSitePatterns PPM-type phosphatase domain signature. 75 83 IPR000222 GO:0043169
Gabi4826g00005 382 ProSiteProfiles PPM-type phosphatase domain profile. 49 359 IPR001932 -
Gabi4826g00005 382 Gene3D - 40 367 IPR036457 -
Gabi4826g00005 382 Pfam Protein phosphatase 2C 59 329 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4826g00005 Gabi-Chr4826 107198 112918 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4826g00005 1 379 PP2C-type Phosphatase Gene Family AT4G38520 57.216 9.07e-156 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4826g00005 K01102 - gmx:100790813 651.358