Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4826g00004 ATGCTTCATGCATTGATGAATCTTATCTCTCAATGTTGGAAGCCGTTCGGGCGCGGTGATGAATCTTCTTCAGCAGGCATTGTCGGAAGAGAAGGCAAAGACGGATTGCTCTGGTTCAAAGACATCGGAAAATATGGCTCTGGCGATTTCTCCATGGCGGTGGTTCAGGCCAACCACGTCCTCGAAGACCAGAGCCAGATCGAGTCTGGTCCTCTCGGCACCTTCGTCGGCATTTACGACGGCCACGGAGGCCCCGATGCAGCGCGTTACGTTTGCGATCACTTGTTCCGCAATTTCCGAGCAATATCGGCTGAGTCACGTGGAGTTGTGACGACTGAGACTATTGAAACAGCATTTCGCCGAACAGAAGAGGGGTTCACCGCCCTTGTTTCAGAATTATGGAGTACTCGACCTCAAGTTGCAACTACTGGATCGTGTTGTCTGGTTGGAGTTATTTATCAGCAGACACTATTTGTGGCAAATGTTGGGGATTCTCGCCTTGTGTTGGGTAGGAAAGTTGGCAACACCGGTGGGGTTGCTTCGATTCAGCTTTCTACGGAACACAATGCAAATATTGAGGCTGTTAGACAGGAACTTAAAGAATTACACCCTGATGATCCCCAAATTGTTGTTCTCAAACATGGAGTGTGGAAAGTAAAAGGCATTATTCAGGTTTCTAGATCCATAGGCGACGTATATATGAAACATGCGCGGTTTAACCGGGAACCAATTAATGCAAAATTCAGACTTCCTGAACCAATGAACATGCCTATCTTGTCTGCTAATCCAACTATTATTTCCCATCCTCTCCAACCAAATGATTCCTTCCTTATATTTGCATCAGATGGTTTATGGGAGCACCTGAGTAATGAAAGAGCGGTGGAGATTGTTCACAGCAATCCACGCGTGGGTAGTGCCAAGAGACTTGTAAAGGCTGCCCTACACGAAGCTGCAAGAAAACGTGAAATGCGATATTCAGACCTTCATAAGATTGACAAGAAGGTTCGACGCCATTTTCATGACGATATAACTGTTATTGTTTTATTCTTAAATCACGACCTTATATCCAGAGGCACAGTTCTAAACCCGCCACTCTCAATTCGAAGTGCTCTCGATCACTGA 1122 0.4608 MLHALMNLISQCWKPFGRGDESSSAGIVGREGKDGLLWFKDIGKYGSGDFSMAVVQANHVLEDQSQIESGPLGTFVGIYDGHGGPDAARYVCDHLFRNFRAISAESRGVVTTETIETAFRRTEEGFTALVSELWSTRPQVATTGSCCLVGVIYQQTLFVANVGDSRLVLGRKVGNTGGVASIQLSTEHNANIEAVRQELKELHPDDPQIVVLKHGVWKVKGIIQVSRSIGDVYMKHARFNREPINAKFRLPEPMNMPILSANPTIISHPLQPNDSFLIFASDGLWEHLSNERAVEIVHSNPRVGSAKRLVKAALHEAARKREMRYSDLHKIDKKVRRHFHDDITVIVLFLNHDLISRGTVLNPPLSIRSALDH 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4826g00004 373 ProSiteProfiles PPM-type phosphatase domain profile. 49 350 IPR001932 -
Gabi4826g00004 373 Gene3D - 40 358 IPR036457 -
Gabi4826g00004 373 SMART PP2C_4 43 348 IPR001932 -
Gabi4826g00004 373 Pfam Protein phosphatase 2C 59 320 IPR001932 -
Gabi4826g00004 373 SUPERFAMILY PP2C-like 58 351 IPR036457 -
Gabi4826g00004 373 ProSitePatterns PPM-type phosphatase domain signature. 75 83 IPR000222 GO:0043169
Gabi4826g00004 373 PANTHER PROTEIN PHOSPHATASE 47 348 IPR015655 GO:0004722|GO:0006470
Gabi4826g00004 373 FunFam Probable protein phosphatase 2C 42 40 358 - -
Gabi4826g00004 373 CDD PP2Cc 50 350 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4826g00004 Gabi-Chr4826 107198 112918 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4826g00004 1 370 PP2C-type Phosphatase Gene Family AT4G38520 58.311 1.29e-158 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4826g00004 K01102 - gmx:100790813 659.062