Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4819g00005 ATGCAGCTCCAATTTGATTCCCAGTTTTTCATGTCCATTGTGTTTCTGGGTTTTGTTGTGTTGTTGTTTCATTTGTATAATGTCTTGGTGGAGAAGCCAAATAAGCTTCGCTCTAAGCTAAGGAAGCAAGGTATCAATGGTCCACCTCCAACTATACTACTTGGAAATATTAGGGAGATAAAGAAAGCTCAACGTATCACTGCAAATAATTCTTCTATTGAATCCAATTCCTCTCACAACTGTGCTGCTTATGTTCTCCCCCTATTTGAGAAATGGAGGGAGCAATATGGTCAAGTATTTATGTTTTCTCTTGGAAACATACAAATATTGTGTGTGAACCAACCTGACATAGTGAGAGATATCAACACATGCACATCCTTGGACTTGGGGAAGCCTTCATATCAGCAGAAACAACTAGGGCCTATGCTGGGTCAGGGCGTTTTAACTTCAAATGGAACTATATGGGCCCATCAAAGAAAGATCCTAGCTCCAGAACTATACATGGACAAGGTTAAGGGAATGATGAATATAATTAGTGAGTCTTCTATGTCTCTGCTAAACTTGTGGAGTAGTAGAATAGAGGCAGAAGGTGGAGTTGCCGATATAAAAATTGATGAATACATGAGAAGTTTCTCTGGGAATGTTATTGCAAGGGCATGCTTTGGAAGCAATTATTCAAAGGGGGAAGAAATTTTCTTGAAACTTGGAGCTCTCCTAGAGCTCATGTCATGGAAAAATATGTCCAAAAGGGTGGTCCCTGGCATGAGATACCTGCCAACAAAGAGCAATAGAAAAGCATGGTCATTAGAAAAGGAGGTGAGAAATTTGATACTCCAAGGGGTTAAGGAAAGAAAGGACACTACTTTTGAAAAGGACCTGCTGCAAATGGTTCTTGAAGGTGCTAATAAAAGTAATCTCACTCAAGAGGCCAGTGACCGCTTTATTGTTGATAACTGCAAGAATATATACTTGGCAGGCTATGAGACAACTGCAGTTTCTGCTACATGGTGCCTTATGTTGTTGGCCTCAAATCAAAATTGGCAGGATCGTGTTCGTGCTGAGGTACTAGAAATTTGCAAGGGTAGAATACCAGATTCTGATATGCTTTATAAGATGAAGCAGCTGACCATGGTTATTCATGAATCATTGCGGCTTTATCCCCCTGTATCTGTGATGTCAAGGGAAGCCTTCAAGGACATGAAATTTGGGGACATTGATGTCCCCAAGGGCGTTAACCTTTGGACAATGGTGTTAACTTTACATACAAATCCAGATGTATGGGGAGCTGATGCCTACAAATTCAACCCAGAAAGGTTTGCCAATGGAACAATGGGTGCTTGTAACCTGCCACACTTGTATATGCCCTTTGGTGCTGGCCCACGAGTGTGTCTTGGACAGAACTTGGCTATGGCTGAACTTAAGATGCTGATAGCTCTCATTTTGTCTAAATTCTCTTTCACCCTCTCTCCTAAATACATTCATTCACCTGCTATATCGTTGCTCTTGGAGCCTGAGCATGGAGTCCATCTCTTGGTGAAAAAGTTACCAATTGTTCCTTGA 1560 0.4128 MQLQFDSQFFMSIVFLGFVVLLFHLYNVLVEKPNKLRSKLRKQGINGPPPTILLGNIREIKKAQRITANNSSIESNSSHNCAAYVLPLFEKWREQYGQVFMFSLGNIQILCVNQPDIVRDINTCTSLDLGKPSYQQKQLGPMLGQGVLTSNGTIWAHQRKILAPELYMDKVKGMMNIISESSMSLLNLWSSRIEAEGGVADIKIDEYMRSFSGNVIARACFGSNYSKGEEIFLKLGALLELMSWKNMSKRVVPGMRYLPTKSNRKAWSLEKEVRNLILQGVKERKDTTFEKDLLQMVLEGANKSNLTQEASDRFIVDNCKNIYLAGYETTAVSATWCLMLLASNQNWQDRVRAEVLEICKGRIPDSDMLYKMKQLTMVIHESLRLYPPVSVMSREAFKDMKFGDIDVPKGVNLWTMVLTLHTNPDVWGADAYKFNPERFANGTMGACNLPHLYMPFGAGPRVCLGQNLAMAELKMLIALILSKFSFTLSPKYIHSPAISLLLEPEHGVHLLVKKLPIVP 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4819g00005 519 Pfam Cytochrome P450 89 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4819g00005 519 PANTHER CYTOCHROME P450 FAMILY MEMBER 32 507 - -
Gabi4819g00005 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506|GO:0016705
Gabi4819g00005 519 Gene3D Cytochrome P450 33 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4819g00005 519 PRINTS P450 superfamily signature 377 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4819g00005 519 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4819g00005 519 PRINTS P450 superfamily signature 463 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4819g00005 519 PRINTS P450 superfamily signature 325 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4819g00005 519 PRINTS E-class P450 group I signature 314 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4819g00005 519 PRINTS E-class P450 group I signature 93 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4819g00005 519 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4819g00005 519 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4819g00005 519 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4819g00005 519 PRINTS E-class P450 group I signature 211 229 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4819g00005 519 SUPERFAMILY Cytochrome P450 83 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4819g00005 Gabi-Chr4819 114511 117571 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4819g00005 117 512 Cytochrome P450 AT5G24900 46.437 8.85e-131 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4819g00005 K24544 - gmx:100785420 853.588