Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4819g00003 ATGCAGTTCCAATTTGATTCCCAGTTTTTCATATCCATTATGTTTCTTGGTTTTGTTGTGTTGTTGTTTCGTTTGTATGTTGTCTTGGTGGAGAAGCCAAATAGAATTCGCTCTAAACTAAGGAAGCAAGGTATCAGTGGTCCACCTCCAACTATACTACTTGGTAATATTAGGGACATGAAGAAATCTCAGCTTCTCACTGCAAAGTCTCCTTCTTTTGAACCCCCTGCCTTTCACAACTGTGCTTCTGTTCTTCCCTTATTTGAGAAATGGAGGGAACAGTATGGTCAAGTATTCATGTTTTCTCTCGGAAACATACAAATATTGTGTGTGAACCAACCTGACATAGTGAGACATATCACCACATGCACATCCTTGGACTTGGGGAAGCCTTCATATCAGCAGAAACAACTAGGGCCTGTGCTTGGTCAGGGCGTTTTAACTTCAAATGGAACTATATGGGCCCATCAAAGAAATATCCTAGCTCCAGAACTATATATGGAGAAGGTTAAGGGAATGATGAATATAATTAGTCAGTCTTCTATGTCTCTGCTAAACTTGTGGAGTAGTAGAATAGAGGCAGAAGGTGGAGTTGCCGATATAAAAATTGATGAATACATAAGAAGTTTCTCTGGGAATGTTATTTCAAGAGCTTGCTTTGGAAGCAATTATTCCAAGGGGGAACAAATTTTCTTGAAACTTGGAGCTCTCCAAGAGGTCTTGTCATGGAAAAATATGTCCAAAGGAGTCCCTGGCATGAGATACCTGCCAACAAAGACCAATAGGAAAGCATGGGCGTTAGAAAAGGAGGTGAAAAATTTGATACTCCAAGGGGTGAAGGAAAGAAAAGAAACAACTTTTGAAAAAGACCTTCTACAAATGGTTCTTGAAGGTGCTAAGAAGAGTAATCTCACTCTTGAGGCCACTGACTGTTTTATTGTTGATAACTGCAAGAATATATACTTGGCAGGCTATGAGACAACTGCAGTTGCTGCTACATGGTGCCTCATGTTGCTGGCCTCAAATCAAAATTGGCAGGATCGTGTTCGTGCTGAGGTACAAGAAATTTGCAGGGGTAGAATCCCAGATTCTGATATGCTATGTAAGATGAAGCAGCTGAACATGGTTATTCATGAATCATTGCGCCTTTACCCCCCAGTAGCTGTGGTGTCAAGGCAAGCCTTCAAGGACATGAAATTTGGGAATATTGAGGTCCCCAAGGGTGTTAACCTTTGGACAATGGTAGTAACTTTGCATACAAATCCTGATGTCTGGGGAGCTGATGCCTACAAATTCAACCCAGAAAGGTTTGCCAATGGAACCATAGGTGCTTGTAAACTGCCATACGTGTATATGCCTTTTGGGGTTGGCCCACGAGTGTGTCTTGGACAGAACTTGGCTATGGTTGAACTTAAGATGCTGATAGCTCTCATCTTGTGTAAATTCTCTTTCTCCCTCTCTCCCAAATACATTCATTCACCTGCTATAAGAATGCTCATGGAACCTGAGCATGGAGTCTATCTCTTGGTAAAAAAGCTATAA 1542 0.4137 MQFQFDSQFFISIMFLGFVVLLFRLYVVLVEKPNRIRSKLRKQGISGPPPTILLGNIRDMKKSQLLTAKSPSFEPPAFHNCASVLPLFEKWREQYGQVFMFSLGNIQILCVNQPDIVRHITTCTSLDLGKPSYQQKQLGPVLGQGVLTSNGTIWAHQRNILAPELYMEKVKGMMNIISQSSMSLLNLWSSRIEAEGGVADIKIDEYIRSFSGNVISRACFGSNYSKGEQIFLKLGALQEVLSWKNMSKGVPGMRYLPTKTNRKAWALEKEVKNLILQGVKERKETTFEKDLLQMVLEGAKKSNLTLEATDCFIVDNCKNIYLAGYETTAVAATWCLMLLASNQNWQDRVRAEVQEICRGRIPDSDMLCKMKQLNMVIHESLRLYPPVAVVSRQAFKDMKFGNIEVPKGVNLWTMVVTLHTNPDVWGADAYKFNPERFANGTIGACKLPYVYMPFGVGPRVCLGQNLAMVELKMLIALILCKFSFSLSPKYIHSPAIRMLMEPEHGVYLLVKKL 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4819g00003 513 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 454 463 IPR017972 GO:0005506|GO:0016705
Gabi4819g00003 513 SUPERFAMILY Cytochrome P450 79 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4819g00003 513 Pfam Cytochrome P450 88 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4819g00003 513 Gene3D Cytochrome P450 32 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4819g00003 513 PRINTS P450 superfamily signature 461 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4819g00003 513 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4819g00003 513 PRINTS P450 superfamily signature 375 386 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4819g00003 513 PRINTS P450 superfamily signature 323 340 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4819g00003 513 PANTHER CYTOCHROME P450 FAMILY MEMBER 32 505 - -
Gabi4819g00003 513 PRINTS E-class P450 group I signature 92 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4819g00003 513 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4819g00003 513 PRINTS E-class P450 group I signature 374 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4819g00003 513 PRINTS E-class P450 group I signature 332 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4819g00003 513 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4819g00003 513 PRINTS E-class P450 group I signature 210 228 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4819g00003 513 PRINTS E-class P450 group I signature 312 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4819g00003 Gabi-Chr4819 101024 104376 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4819g00003 116 510 Cytochrome P450 AT5G24900 43.735 5.86e-125 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4819g00003 K24544 - gmx:100785420 872.463