Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4810g00002 ATGGAAGGCAACACTTTTGTGAGGCTAGCTTCCAACAAGTTTCTCACAATTGTTATCTTCATCCTTATAGCTATATCTAGCATCACTTCAGCATCCCAAAATTCTACCATCCCTACCAATTCCACTCAAACCAACATTGAAAAAAACAATGCCATTCCCTCCAATTCCATAAGAACCAAATATTATGAGAACACCAATATCATTCCTTCCAATCCCTCCCAAACTTTCAGAACCTACGTTACAACCTCATGCAAGTCAACAACATATCCATCAATATGCTACCAATCTTTATCCCCTTATGCTTCTAAAATTGGAGCAAATCCTCTGAAGCTCTGTAATATCTCTCTCACACTGGCCTTAAAGGGTGCTCATAGTGCATCCTCCACCATATCAAAGCTTTTGAAGAGCAATAATTTGACACACTATGCAGAACAAGTTGTAAAAGATTGCTTTGGCAATGTGAAGGACTCTATAGGACAACTTCAGGACTCTCTTCATGAAATGGGACATTTGAATAATGTTATTGATAAAGAGTTTCAGATTAGCAACATGAAGACATGGGTGAGTGCTTCTATCACCAATGATGAAACTTGCTCAGATGGGTTTGATGAGATGAATGTGGATGCCAATGTGAGGGACAAAATCAGAAAGATTGTTTTGAATGTGGCAAGGAAGACTAGCAATGCTTTGTATTTCATCAACAATCTCAGATACTAA 717 0.3821 MEGNTFVRLASNKFLTIVIFILIAISSITSASQNSTIPTNSTQTNIEKNNAIPSNSIRTKYYENTNIIPSNPSQTFRTYVTTSCKSTTYPSICYQSLSPYASKIGANPLKLCNISLTLALKGAHSASSTISKLLKSNNLTHYAEQVVKDCFGNVKDSIGQLQDSLHEMGHLNNVIDKEFQISNMKTWVSASITNDETCSDGFDEMNVDANVRDKIRKIVLNVARKTSNALYFINNLRY 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4810g00002 238 CDD PMEI-like_3 82 236 - -
Gabi4810g00002 238 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 79 236 IPR035513 -
Gabi4810g00002 238 Pfam Plant invertase/pectin methylesterase inhibitor 79 230 IPR006501 GO:0004857
Gabi4810g00002 238 SMART PMEI_2 75 232 IPR006501 GO:0004857
Gabi4810g00002 238 Gene3D Invertase/pectin methylesterase inhibitor family protein 77 237 IPR035513 -
Gabi4810g00002 238 FunFam Pectinesterase inhibitor 3 75 237 - -
Gabi4810g00002 238 NCBIfam pectinesterase inhibitor domain 74 236 IPR006501 GO:0004857
Gabi4810g00002 238 PANTHER PECTINESTERASE INHIBITOR-LIKE 18 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4810g00002 Gabi-Chr4810 94807 95523 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4810g00002 82 236 Carbohydrate Esterase AT3G14310 26.282 7.90e-13 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4810g00002 - - gmx:100527823 290.812