Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4810g00001 ATGGCAAAGGGTTCCCTTCTTTTCCTTCTTCTTTGTGTCCTGTATTTTGCAGGCATAACAAAGTTTACAACTGCAACTCCCATCAATTTCATCAAGTCCTCTTGCAGCACCACTCAATACCCAGCTCTTTGTGTTGAATCTCTCTCTGTCTATGCCGCAACCATCCAACAAGACCCTCACCAATTGGTCCAAACAGCCTTATCACTAAGCCTCAACAAAACTGAGTCAACCAAGACATTTGTCACAAAGTGCAACAAATTTAGGGGTCTCAAGGCCAGAGAATATGCTGCTTTACATGATTGTGCTGAAGAAATAAGTGATAGTGTGGATAGGCTTCAACGTTCACTCAAAGAACTTAAACTATGCAAGGTCAAGGGTGAAGACTTCACATGGCACATAAGCAATGTTGAGACATGGGTTAGTGCTGTCTTAACTGATGAAACAACTTGCAGTGATGGGTTTGCAGGAAAAGCACTGAATGGGAAAATCAAAGCTTCGATTAGGTCTAGAATGGTGAATGCTGCTCAGGTTACTAGTAATGCTCTTTCACTCATTAACCAGTATGCTGCAAATCACTAG 579 0.4197 MAKGSLLFLLLCVLYFAGITKFTTATPINFIKSSCSTTQYPALCVESLSVYAATIQQDPHQLVQTALSLSLNKTESTKTFVTKCNKFRGLKAREYAALHDCAEEISDSVDRLQRSLKELKLCKVKGEDFTWHISNVETWVSAVLTDETTCSDGFAGKALNGKIKASIRSRMVNAAQVTSNALSLINQYAANH 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4810g00001 192 PANTHER PECTINESTERASE INHIBITOR-LIKE 7 184 - -
Gabi4810g00001 192 CDD PMEI-like_3 33 190 - -
Gabi4810g00001 192 Gene3D Invertase/pectin methylesterase inhibitor family protein 27 188 IPR035513 -
Gabi4810g00001 192 FunFam Pectin methylesterase inhibitor 1 26 188 - -
Gabi4810g00001 192 NCBIfam pectinesterase inhibitor domain 6 188 IPR006501 GO:0004857
Gabi4810g00001 192 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 29 188 IPR035513 -
Gabi4810g00001 192 SMART PMEI_2 26 184 IPR006501 GO:0004857
Gabi4810g00001 192 Pfam Plant invertase/pectin methylesterase inhibitor 29 184 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4810g00001 Gabi-Chr4810 66952 67917 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4810g00001 31 185 Carbohydrate Esterase AT3G14310 28.205 8.86e-20 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4810g00001 - - gmx:100305900 305.834