Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi480g00015 ATGGTGAAGCAAACTCCATTCGCAATCACTCTTCTCCCTTTGATTCTTCTCCTCTTCGTTTTAACAGTTATATATGCAAATGTTGAAGCAGAAGTGGAAGGGGCAAATAAGTCATATGGGGTATATAATAAGAGCAACAACTCTGTGAAACTGTTTGTGTTTGGGGATTCGTACGTTGACACCGGGAATCTCGTGAACTCAGAATCGTATAAGCCTCCCTGTGGAATCACTTTTCCTGGTAAACCTGCTGGAAGGTTCTCCGACGGTCGTGTTCTCACCGATTACGTTGCTTCCTTTCTGAAAATTGAATCTCCCACACCATATGCATTTCGAAATTCGTCGGAAGTAAAATACGGTATGAACTTTGCTTATGGAGGGACAGGTATTTTCGATACTTTGATTGATGGACCAAACATGACTGTCCAAATCGACTTATTTGAGAAGCTAATCGAACAAAAAGTCTACACCAAACACGACCTTGAATCATCAATTGCTCTTGTGAACGCAGCTGGTAACGACTATGGTACATTTATACTTAAAAATGGGAGCACGCAGGATATCCCAGCTTTCAGTGCATCGCTTATCAAGCAGATGTCCCTAAATCTGAAACGCATCCACAGCTTTGGAGTAAATAAAATAGCAGTTGGGTTATTAGAACCTGTAGGGTGTATGCCTATGTTAACTGCGACATCTTCGTATGACAAGTGCATTGAGAATTTCAACTTGGTCTCCCAAAATCACAGCCAATTGCTGCTCCAAACCGTGCAAGATCTGAACAACAAAATGAGAAAACCGGTTTTCGTGACACTGGACCTTTACAACTCTTTCCTCTCCACAATTGCAACAATGCAGAAAAAGCGTGCTGAAAACTCAACAGTGACGAATCCGTTGCAACCTTGTTGTGTGGGAGTGAGTGAGGGATTTCATTGTGGGAGTGTGGATGAGAAAGGAGAAAAGAAATATACTCTATGTGAGAAACCGGAGCTTTCATTCTTTTGGGACTCAGTTCACCCTTCTCAAAATGGTTGGAATGAAGTCTACAAGATGTTGCAATCTTCTCTCCCCAAACTTATAGATATATAA 1083 0.4155 MVKQTPFAITLLPLILLLFVLTVIYANVEAEVEGANKSYGVYNKSNNSVKLFVFGDSYVDTGNLVNSESYKPPCGITFPGKPAGRFSDGRVLTDYVASFLKIESPTPYAFRNSSEVKYGMNFAYGGTGIFDTLIDGPNMTVQIDLFEKLIEQKVYTKHDLESSIALVNAAGNDYGTFILKNGSTQDIPAFSASLIKQMSLNLKRIHSFGVNKIAVGLLEPVGCMPMLTATSSYDKCIENFNLVSQNHSQLLLQTVQDLNNKMRKPVFVTLDLYNSFLSTIATMQKKRAENSTVTNPLQPCCVGVSEGFHCGSVDEKGEKKYTLCEKPELSFFWDSVHPSQNGWNEVYKMLQSSLPKLIDI 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi480g00015 360 Pfam GDSL-like Lipase/Acylhydrolase 51 343 IPR001087 GO:0016788
Gabi480g00015 360 Gene3D SGNH hydrolase 38 356 IPR036514 -
Gabi480g00015 360 PANTHER OSJNBB0059K02.9 PROTEIN 26 358 - -
Gabi480g00015 360 SUPERFAMILY SGNH hydrolase 50 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi480g00015 Gabi-Chr480 69327 73407 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi480g00015 18 356 Pollen Coat Proteome AT1G75930 25.867 1.20e-17 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi480g00015 - - gmx:100790884 499.204