Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi480g00007 ATGGAGGAAGAGTTGGATGCAGATGATGTAGTGAGGTCAGTGATGAGCAGCATGAGGATGAACAATGGATCTTCAAGCAGAAGGAGTTTGTGGAGTGGACATGGTGATGATGTATTTGAGAGGAGCAATAGGGAAGATGATGAGGAACACCTCAAGTGGGCTGCTATACAGAGGCTTCCCACTTTTGAAAGGCTGAGGAAAACCATAGTCAAACAAGTTTTAGAGAGTGGAAGATTCAACTATGAGGAGATTGACATATCCAAGCTTGGTATGCTAGAAAAGAAGAAACTCCTTGATGGTGTACTAAGGACTGTTGAAGAAGACAATGAGAAGTTCCTCACTAAGATGAGGGAGAGGATTGATAGGGTGGCTGTAGAGATTCCAAAGGTTGAAGTACGATTTGAACATTTGTATGTTGAAGGGGATGCATATATTGGAACCAGAGCACTGCCAACACTAGTGAATTCCACCATGAATGCCATAGAGAGAGTTCTTGGATCAATCAAACTTCTCCCCTCAAAGAAAAGTGTTGTCAACATACTTCAAGATGTTAGTGGAATCGTCAAGCCATCAAGAATGACCTTACTTTTGGGGCCTCCGGGATCAGGAAAAACTACACTGCTGCAGGCACTTGCTGGGAAACTGGACAGGGATTTAAGGGTATCAGGAAGAGTCACTTACTGTGGTCATGAGTTATCAGAGTTTGTTCCTCAAAGAACATGTGCTTATATTAGTCAGCATAATCTTCATCATGGAGAGATGTCAGTCAGAGAGACACTGGACTTTTCTGGACGTTGCTTGGGAGTTGGAACAAGGCATGACCTACTAGTGGAATTGACAAGGCGAGAAAAGCAAGAAGGAACCAAACCAGATCCAGAGATAGATGCTTTCATGAAAGCCACTGCAATGGAAGATCAAGAAACAAGTCTCATTACAGATTATGTTCTCAAGATTCTTGGATTGGAAATATGTGCTGATACTTTGGTAGGAGATGAGATGAGAAGGGGAATATCTGGTGGAGAAAAAAAGCGGTTAACCATTGGTGAGATGTTGGTAGGACCTGCAAAAGTTTTCTTAATGGATGAGATTTCAACTGGTTTGGATAGTTCCACAACCTTCCAAATTGTTAGGTTCTTGAGGCAGCTAGTTCATATCATGGATGTTACAATGATAATCTCTCTATTACAACCTGCTCCAGAAACATTTGAACTTTTTGATGACATAATCTTACTTTCAGAAGGTCAGATTGTGTACCAAGGTCCACGTGAGAATGTTCTCAATTTTTTTGAGAGTGTGGGGTTCAAATGCCCAGAAAGGAAAGGAGTTGCAGACTTTCTACAGGAGGTTACTTCCAGAAAGGACCAAGAGCAGTACTGGTTAACAAGGGACAAACCTTACCATTATATCAGTGTGCCTGAGTTTGTAGCCCACTTCAATAACTATGACATTGGCCAACAACTTTGTGAAGAGCTTCAGGTTCCTTTTGACCGTACTAAAACTCATCCTGCTGCATTGGTTAAAGATAAATATGGAATTTCAAAACTAGAACTCTTCAAGGCATGCTTTGCAAGAGAGTGGCTACTGATGAAGCGCAGCGCTTTTATATATATATTTAAGACTACTCAGATTATAATAATGTCTTTGATTACTATGACAGTGTTTCTTAGGACAGAAATGAAACATGGCCAACTTGAGGATGGGAGAAAATTTTATGGTGCACTATTCTTCAGTCTCATCAATGTAATGTTCAATGGAATGGCTGAGCTTGCAATGACTGTTTTTAGACTTCCTGTTTTCTTCAAGCAGAGAGACCTATTATTTTATCCGGCATGGGCTTTTGCACTTCCCATATGGATCTTTCGAATCCCTCTCTCTTTGTTGGAGTCAGGATTATGGGTTGTCCTTACTTATTACACTGTAGGGTTTGCTCCAGCTGCAAGTAGATTTTTTCGTCAGTTATTAGCATTCTTCTGCGTTCATCAAATGGGGCTGACTCTATTCCGATTCATTGCTGGTCTTGGAAGAACAGTGATTGTGGCAAGTACAATTGGTACCTTTATACTGCTACTTGTTTTTATACTTGGAGGGTTCGTTATCGCCAGAGATGACATTGAACCGTGGATGATATGGGGCTATTATGCTTCTCCTATGATGTATGGTCAGAATGCAATTGTCATCAATGAATTCCTTGACAAGAGATGGAGTGCTCCCAATATGGACCCAAGAATTCCTGAGCCCACAGTTGGGAAGGCTCTTCTCAGGGCTAGAGGCATGTTTACAGAAGACTATTGGTACTGGATTTGTATTGGTGCTCTCCTAGGATTTTCTCTGTTTTTCAACATTTGTTTTATTGTTGCTCTGACATTTCTGAATCCATTTGGAGATTCTAAATCTATTGTTGTGGAGGAGGAAAACAAGAAAACGGAAGCTACAGAAGAGAGTTCTACTTCAACTGCTAAATCATTTGAACATACAGTCTTTGATATGGCAGAAAGAAACACCTCAGAGAGTTCAATTCCCAAAGCAGACACTACAACCACCAAGAGCGGAATGGTGTTACCCTTTAGGCCCCTATCACTTGCTTTTGATCACGTGAATTACTACATCAACATGCCAACTGAAATGAAGAAACAAGGAGTTGAAGAGAGTCGCCTCCAATTACTAAGAGATGTCAGTGGTGCTTTCAGGCCTGGAGTACTTACAGCATTAGTAGGTGTAACAGGTGCTGGAAAAACCACCTTGATGGATGTTCTTGCTGGAAGAAAAACTGGTGGTTATATTGAAGGCAGCATCAGCTTATCTGGTTTCCCAAAGAAACAAGAAACTTTTGCTAGGATTAGTGGATATTGTGAACAAAATGATATCCATTCTCCAAATGTGACAGTCTATGAATCTATTGTGTTTTCTGCTTGGCTGCGTCTTGGTAAGGAGGTCAAGAGAGAAAGACAGAAGATGTTCATTGAGGAAGTTATGAAACTTGTTGAACTACATCCAGTGAGAAATTTTCTAGTAGGCCTTCCTGGCATAGATGGTTTATCAACTGAACAAAGGAAAAGACTCACCATTGCTGTAGAATTGGTTGCCAATCCTTCTATCATCTTTATGGACGAGCCGACCTCAGGCCTTGATGCTAGAGCTGCAGCAGTTGTTATGCGTACTGTCAGAAATACAGTGGATACAGGGAGAACTGTAGTCTGCACAATTCATCAACCAAGCATTGACATATTTGAATCTTTTGATGAGTTGCTTTTGATGAAGAGAGGAGGACAAATCATATATAGTGGTCCCCTTGGTCAACATTCTCAGAAGCTTATAGAGTACTTTGAGGCTATTCCAGGAGTTCCGAGAATCAAAGATGGATATAATCCTGCCACATGGATGTTGGAGATCAGTTCTCCAGCAGTTGAGTCTCAGCTTAGTGTAGACTTTGCAGAATTGTACACTAAGTCAGAATTGTACCAGAGGAATCAAGAACTTATTAAAGAGCTAAGCACACCATTACAGGGAACCAAGGACCTTAATTTCGCTACTCAATACTCCCAGTCCTTCATTACTCAATGTAAAGCTTGCTTCTGGAAACAGCGATCATCCTACTGGAAGAACCCACAGTATAATGCCATCCGTTTCTTCTTATCAATATCTGCAGGCGTTATTTTTGGACTCATTTTCTGGAAAAAAGGAGATAAAATACAAACGGAACAAGAACTTATGAATCTAATGGGAGCTATGTATACTGCTATTTTCTTTGTTGGATCCCTCAACACTAACTCTGTTCAACCGGTAGTTGCAATAGAAAGAATGGTCTACTACCGTGAAAAAGCGGCTGGAATGTACTCAGCTCTCCCTTATGCATTAGCTCAGGTAGCAATAGAATGTATTTATGTTGCAATCCAAACATTGGCCTTTAGTCTTATCCTTTACTCAATGATTGGGTTCCTCTGGCAAGTTGACAAGTTCTTCTGGTTCTACTACTTCATATGCATGTCCTTCATCTACTTCACACTTTACGGAATGATGACTGTGGCGCTGACACCAAATCACCAAATTGCTGCAATTGTTATGTCCTTCTTTTTAGTGTTGTGGAACATATTCTCTGGTTTCCTTATTCCAAAATCGCAAATTCCAATATGGTGGAGGTGGTATTACTGGGCGTGCCCAACTTCTTGGACTATATATGGTCTATTGACATCCCAGATGGGTGACAATGATACTCCAATTGAGGTACCTGGATCTGGAACAATATCACTAAAAGCATACCTTGAGAAACAGATGGACTATAAATATAGCTTCCTTGGAGTTGCTGCAGTGGCTCAAATTGCTTTTGCTGCACTGTTTCTTTTTGTATTTGCATACGGTATCAAGTTCCTTAATTTCCAGAAGAGATAA 4386 0.4072 MEEELDADDVVRSVMSSMRMNNGSSSRRSLWSGHGDDVFERSNREDDEEHLKWAAIQRLPTFERLRKTIVKQVLESGRFNYEEIDISKLGMLEKKKLLDGVLRTVEEDNEKFLTKMRERIDRVAVEIPKVEVRFEHLYVEGDAYIGTRALPTLVNSTMNAIERVLGSIKLLPSKKSVVNILQDVSGIVKPSRMTLLLGPPGSGKTTLLQALAGKLDRDLRVSGRVTYCGHELSEFVPQRTCAYISQHNLHHGEMSVRETLDFSGRCLGVGTRHDLLVELTRREKQEGTKPDPEIDAFMKATAMEDQETSLITDYVLKILGLEICADTLVGDEMRRGISGGEKKRLTIGEMLVGPAKVFLMDEISTGLDSSTTFQIVRFLRQLVHIMDVTMIISLLQPAPETFELFDDIILLSEGQIVYQGPRENVLNFFESVGFKCPERKGVADFLQEVTSRKDQEQYWLTRDKPYHYISVPEFVAHFNNYDIGQQLCEELQVPFDRTKTHPAALVKDKYGISKLELFKACFAREWLLMKRSAFIYIFKTTQIIIMSLITMTVFLRTEMKHGQLEDGRKFYGALFFSLINVMFNGMAELAMTVFRLPVFFKQRDLLFYPAWAFALPIWIFRIPLSLLESGLWVVLTYYTVGFAPAASRFFRQLLAFFCVHQMGLTLFRFIAGLGRTVIVASTIGTFILLLVFILGGFVIARDDIEPWMIWGYYASPMMYGQNAIVINEFLDKRWSAPNMDPRIPEPTVGKALLRARGMFTEDYWYWICIGALLGFSLFFNICFIVALTFLNPFGDSKSIVVEEENKKTEATEESSTSTAKSFEHTVFDMAERNTSESSIPKADTTTTKSGMVLPFRPLSLAFDHVNYYINMPTEMKKQGVEESRLQLLRDVSGAFRPGVLTALVGVTGAGKTTLMDVLAGRKTGGYIEGSISLSGFPKKQETFARISGYCEQNDIHSPNVTVYESIVFSAWLRLGKEVKRERQKMFIEEVMKLVELHPVRNFLVGLPGIDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELLLMKRGGQIIYSGPLGQHSQKLIEYFEAIPGVPRIKDGYNPATWMLEISSPAVESQLSVDFAELYTKSELYQRNQELIKELSTPLQGTKDLNFATQYSQSFITQCKACFWKQRSSYWKNPQYNAIRFFLSISAGVIFGLIFWKKGDKIQTEQELMNLMGAMYTAIFFVGSLNTNSVQPVVAIERMVYYREKAAGMYSALPYALAQVAIECIYVAIQTLAFSLILYSMIGFLWQVDKFFWFYYFICMSFIYFTLYGMMTVALTPNHQIAAIVMSFFLVLWNIFSGFLIPKSQIPIWWRWYYWACPTSWTIYGLLTSQMGDNDTPIEVPGSGTISLKAYLEKQMDYKYSFLGVAAVAQIAFAALFLFVFAYGIKFLNFQKR 1461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi480g00007 1461 Gene3D - 874 1110 IPR027417 -
Gabi480g00007 1461 Pfam ABC-2 type transporter 396 448 IPR043926 GO:0140359
Gabi480g00007 1461 Pfam ABC-2 type transporter 1069 1140 IPR043926 GO:0140359
Gabi480g00007 1461 ProSitePatterns ABC transporters family signature. 337 351 IPR017871 GO:0005524|GO:0016887
Gabi480g00007 1461 Pfam Plant PDR ABC transporter associated 742 800 IPR013581 -
Gabi480g00007 1461 Pfam ABC-transporter N-terminal 105 155 IPR029481 -
Gabi480g00007 1461 Pfam ABC transporter 181 363 IPR003439 GO:0005524
Gabi480g00007 1461 CDD ABCG_PDR_domain2 857 1095 IPR034003 -
Gabi480g00007 1461 Pfam ABC-2 type transporter 517 729 IPR013525 GO:0016020|GO:0140359
Gabi480g00007 1461 Pfam ABC-2 type transporter 1185 1398 IPR013525 GO:0016020|GO:0140359
Gabi480g00007 1461 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 165 438 IPR003439 GO:0005524
Gabi480g00007 1461 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 860 1113 IPR003439 GO:0005524
Gabi480g00007 1461 FunFam ABC transporter G family member 34 168 472 - -
Gabi480g00007 1461 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 16 1461 - -
Gabi480g00007 1461 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 438 IPR027417 -
Gabi480g00007 1461 Pfam ABC transporter 888 1040 IPR003439 GO:0005524
Gabi480g00007 1461 Gene3D - 167 469 IPR027417 -
Gabi480g00007 1461 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 884 1100 IPR027417 -
Gabi480g00007 1461 SMART AAA_5 897 1089 IPR003593 GO:0016887
Gabi480g00007 1461 SMART AAA_5 190 415 IPR003593 GO:0016887
Gabi480g00007 1461 FunFam ABC transporter G family member 40 874 1104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi480g00007 Gabi-Chr480 11682 26992 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi480g00007 885 1072 Calmodulin-binding Proteins AT2G36910 26.733 2.63e-07 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi480g00007 K08711 - gmx:100786666 2407.87