Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi480g00006 ATGGAGGAAGAGTTGGATGCAGATGATGTAGTGAGGTCAGTGATGAGCAGCATGAGGATGAACAATGGATCTTCAAGCAGAAGGAGTTTGTGGAGTGGACATGGTGATGATGTATTTGAGAGGAGCAATAGGGAAGATGATGAGGAACACCTCAAGTGGGCTGCTATACAGAGGCTTCCCACTTTTGAAAGGCTGAGGAAAACCATAGTCAAACAAGTTTTAGAGAGTGGAAGATTCAACTATGAGGAGATTGACATATCCAAGCTTGGTATGCTAGAAAAGAAGAAACTCCTTGATGGTGTACTAAGGACTGTTGAAGAAGACAATGAGAAGTTCCTCACTAAGATGAGGGAGAGGATTGATAGGGTGGCTGTAGAGATTCCAAAGGTTGAAGTACGATTTGAACATTTGTATGTTGAAGGGGATGCATATATTGGAACCAGAGCACTGCCAACACTAGTGAATTCCACCATGAATGCCATAGAGAGAGTTCTTGGATCAATCAAACTTCTCCCCTCAAAGAAAAGTGTTGTCAACATACTTCAAGATGTTAGTGGAATCGTCAAGCCATCAAGAATGACCTTACTTTTGGGGCCTCCGGGATCAGGAAAAACTACACTGCTGCAGGCACTTGCTGGGAAACTGGACAGGGATTTAAGGGTATCAGGAAGAGTCACTTACTGTGGTCATGAGTTATCAGAGTTTGTTCCTCAAAGAACATGTGCTTATATTAGTCAGCATAATCTTCATCATGGAGAGATGTCAGTCAGAGAGACACTGGACTTTTCTGGACGTTGCTTGGGAGTTGGAACAAGGCATGACCTACTAGTGGAATTGACAAGGCGAGAAAAGCAAGAAGGAACCAAACCAGATCCAGAGATAGATGCTTTCATGAAAGCCACTGCAATGGAAGATCAAGAAACAAGTCTCATTACAGATTATGTTCTCAAGATTCTTGGATTGGAAATATGTGCTGATACTTTGGTAGGAGATGAGATGAGAAGGGGAATATCTGGTGGAGAAAAAAAGCGGTTAACCATTGGTGAGATGTTGGTAGGACCTGCAAAAGTTTTCTTAATGGATGAGATTTCAACTGGTTTGGATAGTTCCACAACCTTCCAAATTGTTAGGTTCTTGAGGCAGCTAGTTCATATCATGGATGTTACAATGATAATCTCTCTATTACAACCTGCTCCAGAAACATTTGAACTTTTTGATGACATAATCTTACTTTCAGAAGGTCAGATTGTGTACCAAGGTCCACGTGAGAATGTTCTCAATTTTTTTGAGAGTGTGGGGTTCAAATGCCCAGAAAGGAAAGGAGTTGCAGACTTTCTACAGGAGGTTACTTCCAGAAAGGACCAAGAGCAGTACTGGTTAACAAGGGACAAACCTTACCATTATATCAGTGTGCCTGAGTTTGTAGCCCACTTCAATAACTATGACATTGGCCAACAACTTTGTGAAGAGCTTCAGGTTCCTTTTGACCGTACTAAAACTCATCCTGCTGCATTGGTTAAAGATAAATATGGAATTTCAAAACTAGAACTCTTCAAGGCATGCTTTGCAAGAGAGTGGCTACTGATGAAGCGCAGCGCTTTTATATATATATTTAAGACTACTCAGATTATAATAATGTCTTTGATTACTATGACAGTGTTTCTTAGGACAGAAATGAAACATGGCCAACTTGAGGATGGGAGAAAATTTTATGGTGCACTATTCTTCAGTCTCATCAATGTAATGTTCAATGGAATGGCTGAGCTTGCAATGACTGTTTTTAGACTTCCTGTTTTCTTCAAGCAGAGAGACCTATTATTTTATCCGGCATGGGCTTTTGCACTTCCCATATGGATCTTTCGAATCCCTCTCTCTTTGTTGGAGTCAGGATTATGGGTTGTCCTTACTTATTACACTGTAGGGTTTGCTCCAGCTGCAAGTAGATTTTTTCGTCAGTTATTAGCATTCTTCTGCGTTCATCAAATGGGGCTGACTCTATTCCGATTCATTGCTGGTCTTGGAAGAACAGTGATTGTGGCAAGTACAATTGGTACCTTTATACTGCTACTTGTTTTTATACTTGGAGGGTTCGTTATCGCCAGAGATGACATTGAACCGTGGATGATATGGGGCTATTATGCTTCTCCTATGATGTATGGTCAGAATGCAATTGTCATCAATGAATTCCTTGACAAGAGATGGAGTGCTCCCAATATGGACCCAAGAATTCCTGAGCCCACAGTTGGGAAGGCTCTTCTCAGGGCTAGAGGCATGTTTACAGAAGACTATTGGTACTGGATTTGTATTGGTGCTCTCCTAGGATTTTCTCTGTTTTTCAACATTTGTTTTATTGTTGCTCTGACATTTCTGAATCCATTTGGAGATTCTAAATCTATTGTTGTGGAGGAGGAAAACAAGAAAACGGAAGCTACAGAAGAGAGTTCTACTTCAACTGCTAAATCATTTGAACTCTTTGATATGGCAGAAAGAAACACCTCAGAGAGTTCAATTCCCAAAGCAGACACTACAACCACCAAGAGCGGAATGGTGTTACCCTTTAGGCCCCTATCACTTGCTTTTGATCACGTGAATTACTACATCAACATGCCAACTGAAATGAAGAAACAAGGAGTTGAAGAGAGTCGCCTCCAATTACTAAGAGATGTCAGTGGTGCTTTCAGGCCTGGAGTACTTACAGCATTAGTAGGTGTAACAGGTGCTGGAAAAACCACCTTGATGGATGTTCTTGCTGGAAGAAAAACTGGTGGTTATATTGAAGGCAGCATCAGCTTATCTGGTTTCCCAAAGAAACAAGAAACTTTTGCTAGGATTAGTGGATATTGTGAACAAAATGATATCCATTCTCCAAATGTGACAGTCTATGAATCTATTGTGTTTTCTGCTTGGCTGCGTCTTGGTAAGGAGGTCAAGAGAGAAAGACAGAAGATGTTCATTGAGGAAGTTATGAAACTTGTTGAACTACATCCAGTGAGAAATTTTCTAGTAGGCCTTCCTGGCATAGATGGTTTATCAACTGAACAAAGGAAAAGACTCACCATTGCTGTAGAATTGGTTGCCAATCCTTCTATCATCTTTATGGACGAGCCGACCTCAGGCCTTGATGCTAGAGCTGCAGCAGTTGTTATGCGTACTGTCAGAAATACAGTGGATACAGGGAGAACTGTAGTCTGCACAATTCATCAACCAAGCATTGACATATTTGAATCTTTTGATGAGTTGCTTTTGATGAAGAGAGGAGGACAAATCATATATAGTGGTCCCCTTGGTCAACATTCTCAGAAGCTTATAGAGTACTTTGAGGCTATTCCAGGAGTTCCGAGAATCAAAGATGGATATAATCCTGCCACATGGATGTTGGAGATCAGTTCTCCAGCAGTTGAGTCTCAGCTTAGTGTAGACTTTGCAGAATTGTACACTAAGTCAGAATTGTACCAGAGGAATCAAGAACTTATTAAAGAGCTAAGCACACCATTACAGGGAACCAAGGACCTTAATTTCGCTACTCAATACTCCCAGTCCTTCATTACTCAATGTAAAGCTTGCTTCTGGAAACAGCGATCATCCTACTGGAAGAACCCACAGTATAATGCCATCCGTTTCTTCTTATCAATATCTGCAGGCGTTATTTTTGGACTCATTTTCTGGAAAAAAGGAGATAAAATACAAACGGAACAAGAACTTATGAATCTAATGGGAGCTATGTATACTGCTATTTTCTTTGTTGGATCCCTCAACACTAACTCTGTTCAACCGGTAGTTGCAATAGAAAGAATGGTCTACTACCGTGAAAAAGCGGCTGGAATGTACTCAGCTCTCCCTTATGCATTAGCTCAGGTAGCAATAGAATGTATTTATGTTGCAATCCAAACATTGGCCTTTAGTCTTATCCTTTACTCAATGATTGGGTTCCTCTGGCAAGTTGACAAGTTCTTCTGGTTCTACTACTTCATATGCATGTCCTTCATCTACTTCACACTTTACGGAATGATGACTGTGGCGCTGACACCAAATCACCAAATTGCTGCAATTGTTATGTCCTTCTTTTTAGTGTTGTGGAACATATTCTCTGGTTTCCTTATTCCAAAATCGCAAATTCCAATATGGTGGAGGTGGTATTACTGGGCGTGCCCAACTTCTTGGACTATATATGGTCTATTGACATCCCAGATGGGTGACAATGATACTCCAATTGAGGTACCTGGATCTGGAACAATATCACTAAAAGCATACCTTGAGAAACAGATGGACTATAAATATAGCTTCCTTGGAGTTGCTGCAGTGGCTCAAATTGCTTTTGCTGCACTGTTTCTTTTTGTATTTGCATACGGTATCAAGTTCCTTAATTTCCAGAAGAGATAA 4380 0.4073 MEEELDADDVVRSVMSSMRMNNGSSSRRSLWSGHGDDVFERSNREDDEEHLKWAAIQRLPTFERLRKTIVKQVLESGRFNYEEIDISKLGMLEKKKLLDGVLRTVEEDNEKFLTKMRERIDRVAVEIPKVEVRFEHLYVEGDAYIGTRALPTLVNSTMNAIERVLGSIKLLPSKKSVVNILQDVSGIVKPSRMTLLLGPPGSGKTTLLQALAGKLDRDLRVSGRVTYCGHELSEFVPQRTCAYISQHNLHHGEMSVRETLDFSGRCLGVGTRHDLLVELTRREKQEGTKPDPEIDAFMKATAMEDQETSLITDYVLKILGLEICADTLVGDEMRRGISGGEKKRLTIGEMLVGPAKVFLMDEISTGLDSSTTFQIVRFLRQLVHIMDVTMIISLLQPAPETFELFDDIILLSEGQIVYQGPRENVLNFFESVGFKCPERKGVADFLQEVTSRKDQEQYWLTRDKPYHYISVPEFVAHFNNYDIGQQLCEELQVPFDRTKTHPAALVKDKYGISKLELFKACFAREWLLMKRSAFIYIFKTTQIIIMSLITMTVFLRTEMKHGQLEDGRKFYGALFFSLINVMFNGMAELAMTVFRLPVFFKQRDLLFYPAWAFALPIWIFRIPLSLLESGLWVVLTYYTVGFAPAASRFFRQLLAFFCVHQMGLTLFRFIAGLGRTVIVASTIGTFILLLVFILGGFVIARDDIEPWMIWGYYASPMMYGQNAIVINEFLDKRWSAPNMDPRIPEPTVGKALLRARGMFTEDYWYWICIGALLGFSLFFNICFIVALTFLNPFGDSKSIVVEEENKKTEATEESSTSTAKSFELFDMAERNTSESSIPKADTTTTKSGMVLPFRPLSLAFDHVNYYINMPTEMKKQGVEESRLQLLRDVSGAFRPGVLTALVGVTGAGKTTLMDVLAGRKTGGYIEGSISLSGFPKKQETFARISGYCEQNDIHSPNVTVYESIVFSAWLRLGKEVKRERQKMFIEEVMKLVELHPVRNFLVGLPGIDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELLLMKRGGQIIYSGPLGQHSQKLIEYFEAIPGVPRIKDGYNPATWMLEISSPAVESQLSVDFAELYTKSELYQRNQELIKELSTPLQGTKDLNFATQYSQSFITQCKACFWKQRSSYWKNPQYNAIRFFLSISAGVIFGLIFWKKGDKIQTEQELMNLMGAMYTAIFFVGSLNTNSVQPVVAIERMVYYREKAAGMYSALPYALAQVAIECIYVAIQTLAFSLILYSMIGFLWQVDKFFWFYYFICMSFIYFTLYGMMTVALTPNHQIAAIVMSFFLVLWNIFSGFLIPKSQIPIWWRWYYWACPTSWTIYGLLTSQMGDNDTPIEVPGSGTISLKAYLEKQMDYKYSFLGVAAVAQIAFAALFLFVFAYGIKFLNFQKR 1459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi480g00006 1459 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 858 1111 IPR003439 GO:0005524
Gabi480g00006 1459 ProSitePatterns ABC transporters family signature. 337 351 IPR017871 GO:0005524|GO:0016887
Gabi480g00006 1459 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 16 1459 - -
Gabi480g00006 1459 Pfam ABC-2 type transporter 1183 1396 IPR013525 GO:0016020|GO:0140359
Gabi480g00006 1459 Pfam ABC-2 type transporter 517 729 IPR013525 GO:0016020|GO:0140359
Gabi480g00006 1459 Pfam Plant PDR ABC transporter associated 742 800 IPR013581 -
Gabi480g00006 1459 Pfam ABC transporter 886 1038 IPR003439 GO:0005524
Gabi480g00006 1459 FunFam ABC transporter G family member 40 872 1102 - -
Gabi480g00006 1459 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 165 438 IPR003439 GO:0005524
Gabi480g00006 1459 Pfam ABC-2 type transporter 396 448 IPR043926 GO:0140359
Gabi480g00006 1459 Pfam ABC-2 type transporter 1067 1138 IPR043926 GO:0140359
Gabi480g00006 1459 Pfam ABC transporter 181 363 IPR003439 GO:0005524
Gabi480g00006 1459 FunFam ABC transporter G family member 34 168 472 - -
Gabi480g00006 1459 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 438 IPR027417 -
Gabi480g00006 1459 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 882 1098 IPR027417 -
Gabi480g00006 1459 CDD ABCG_PDR_domain2 855 1093 IPR034003 -
Gabi480g00006 1459 Pfam ABC-transporter N-terminal 105 155 IPR029481 -
Gabi480g00006 1459 Gene3D - 167 469 IPR027417 -
Gabi480g00006 1459 Gene3D - 872 1108 IPR027417 -
Gabi480g00006 1459 SMART AAA_5 190 415 IPR003593 GO:0016887
Gabi480g00006 1459 SMART AAA_5 895 1087 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi480g00006 Gabi-Chr480 11682 26992 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi480g00006 883 1070 Calmodulin-binding Proteins AT2G36910 27.094 2.81e-07 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi480g00006 K08711 - gmx:100786666 2402.48