Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi480g00005 ATGGAGGAAGAGTTGGATGCAGATGATGTAGTGAGGTCAGTGATGAGCAGCATGAGGATGAACAATGGATCTTCAAGCAGAAGGAGTTTGTGGAGTGGACATGGTGATGATGTATTTGAGAGGAGCAATAGGGAAGATGATGAGGAACACCTCAAGTGGGCTGCTATACAGAGGCTTCCCACTTTTGAAAGGCTGAGGAAAACCATAGTCAAACAAGTTTTAGAGAGTGGAAGATTCAACTATGAGGAGATTGACATATCCAAGCTTGGTATGCTAGAAAAGAAGAAACTCCTTGATGGTGTACTAAGGACTGTTGAAGAAGACAATGAGAAGTTCCTCACTAAGATGAGGGAGAGGATTGATAGGGTGGCTGTAGAGATTCCAAAGGTTGAAGTACGATTTGAACATTTGTATGTTGAAGGGGATGCATATATTGGAACCAGAGCACTGCCAACACTAGTGAATTCCACCATGAATGCCATAGAGAGAGTTCTTGGATCAATCAAACTTCTCCCCTCAAAGAAAAGTGTTGTCAACATACTTCAAGATGTTAGTGGAATCGTCAAGCCATCAAGAATGACCTTACTTTTGGGGCCTCCGGGATCAGGAAAAACTACACTGCTGCAGGCACTTGCTGGGAAACTGGACAGGGATTTAAGGGTATCAGGAAGAGTCACTTACTGTGGTCATGAGTTATCAGAGTTTGTTCCTCAAAGAACATGTGCTTATATTAGTCAGCATAATCTTCATCATGGAGAGATGTCAGTCAGAGAGACACTGGACTTTTCTGGACGTTGCTTGGGAGTTGGAACAAGGCATGACCTACTAGTGGAATTGACAAGGCGAGAAAAGCAAGAAGGAACCAAACCAGATCCAGAGATAGATGCTTTCATGAAAGCCACTGCAATGGAAGATCAAGAAACAAGTCTCATTACAGATTATGTTCTCAAGATTCTTGGATTGGAAATATGTGCTGATACTTTGGTAGGAGATGAGATGAGAAGGGGAATATCTGGTGGAGAAAAAAAGCGGTTAACCATTGGTGAGATGTTGGTAGGACCTGCAAAAGTTTTCTTAATGGATGAGATTTCAACTGGTTTGGATAGTTCCACAACCTTCCAAATTGTTAGGTTCTTGAGGCAGCTAGTTCATATCATGGATGTTACAATGATAATCTCTCTATTACAACCTGCTCCAGAAACATTTGAACTTTTTGATGACATAATCTTACTTTCAGAAGGTCAGATTGTGTACCAAGGTCCACGTGAGAATGTTCTCAATTTTTTTGAGAGTGTGGGGTTCAAATGCCCAGAAAGGAAAGGAGTTGCAGACTTTCTACAGGAGGTTACTTCCAGAAAGGACCAAGAGCAGTACTGGTTAACAAGGGACAAACCTTACCATTATATCAGTGTGCCTGAGTTTGTAGCCCACTTCAATAACTATGACATTGGCCAACAACTTTGTGAAGAGCTTCAGGTTCCTTTTGACCGTACTAAAACTCATCCTGCTGCATTGGTTAAAGATAAATATGGAATTTCAAAACTAGAACTCTTCAAGGCATGCTTTGCAAGAGAGTGGCTACTGATGAAGCGCAGCGCTTTTATATATATATTTAAGACTACTCAGATTATAATAATGTCTTTGATTACTATGACAGTGTTTCTTAGGACAGAAATGAAACATGGCCAACTTGAGGATGGGAGAAAATTTTATGGTGCACTATTCTTCAGTCTCATCAATGTAATGTTCAATGGAATGGCTGAGCTTGCAATGACTGTTTTTAGACTTCCTGTTTTCTTCAAGCAGAGAGACCTATTATTTTATCCGGCATGGGCTTTTGCACTTCCCATATGGATCTTTCGAATCCCTCTCTCTTTGTTGGAGTCAGGATTATGGGTTGTCCTTACTTATTACACTGTAGGGTTTGCTCCAGCTGCAAGTAGATTTTTTCGTCAGTTATTAGCATTCTTCTGCGTTCATCAAATGGGGCTGACTCTATTCCGATTCATTGCTGGTCTTGGAAGAACAGTGATTGTGGCAAGTACAATTGGTACCTTTATACTGCTACTTGTTTTTATACTTGGAGGGTTCGTTATCGCCAGAGATGACATTGAACCGTGGATGATATGGGGCTATTATGCTTCTCCTATGATGTATGGTCAGAATGCAATTGTCATCAATGAATTCCTTGACAAGAGATGGAGTGCTCCCAATATGGACCCAAGAATTCCTGAGCCCACAGTTGGGAAGGCTCTTCTCAGGGCTAGAGGCATGTTTACAGAAGACTATTGGTACTGGATTTGTATTGGTGCTCTCCTAGGATTTTCTCTGTTTTTCAACATTTGTTTTATTGTTGCTCTGACATTTCTGAATCCATTTGGAGATTCTAAATCTATTGTTGTGGAGGAGGAAAATGATATGGCAGAAAGAAACACCTCAGAGAGTTCAATTCCCAAAGCAGACACTACAACCACCAAGAGCGGAATGGTGTTACCCTTTAGGCCCCTATCACTTGCTTTTGATCACGTGAATTACTACATCAACATGCCAACTGAAATGAAGAAACAAGGAGTTGAAGAGAGTCGCCTCCAATTACTAAGAGATGTCAGTGGTGCTTTCAGGCCTGGAGTACTTACAGCATTAGTAGGTGTAACAGGTGCTGGAAAAACCACCTTGATGGATGTTCTTGCTGGAAGAAAAACTGGTGGTTATATTGAAGGCAGCATCAGCTTATCTGGTTTCCCAAAGAAACAAGAAACTTTTGCTAGGATTAGTGGATATTGTGAACAAAATGATATCCATTCTCCAAATGTGACAGTCTATGAATCTATTGTGTTTTCTGCTTGGCTGCGTCTTGGTAAGGAGGTCAAGAGAGAAAGACAGAAGATGTTCATTGAGGAAGTTATGAAACTTGTTGAACTACATCCAGTGAGAAATTTTCTAGTAGGCCTTCCTGGCATAGATGGTTTATCAACTGAACAAAGGAAAAGACTCACCATTGCTGTAGAATTGGTTGCCAATCCTTCTATCATCTTTATGGACGAGCCGACCTCAGGCCTTGATGCTAGAGCTGCAGCAGTTGTTATGCGTACTGTCAGAAATACAGTGGATACAGGGAGAACTGTAGTCTGCACAATTCATCAACCAAGCATTGACATATTTGAATCTTTTGATGAGTTGCTTTTGATGAAGAGAGGAGGACAAATCATATATAGTGGTCCCCTTGGTCAACATTCTCAGAAGCTTATAGAGTACTTTGAGGCTATTCCAGGAGTTCCGAGAATCAAAGATGGATATAATCCTGCCACATGGATGTTGGAGATCAGTTCTCCAGCAGTTGAGTCTCAGCTTAGTGTAGACTTTGCAGAATTGTACACTAAGTCAGAATTGTACCAGAGGAATCAAGAACTTATTAAAGAGCTAAGCACACCATTACAGGGAACCAAGGACCTTAATTTCGCTACTCAATACTCCCAGTCCTTCATTACTCAATGTAAAGCTTGCTTCTGGAAACAGCGATCATCCTACTGGAAGAACCCACAGTATAATGCCATCCGTTTCTTCTTATCAATATCTGCAGGCGTTATTTTTGGACTCATTTTCTGGAAAAAAGGAGATAAAATACAAACGGAACAAGAACTTATGAATCTAATGGGAGCTATGTATACTGCTATTTTCTTTGTTGGATCCCTCAACACTAACTCTGTTCAACCGGTAGTTGCAATAGAAAGAATGGTCTACTACCGTGAAAAAGCGGCTGGAATGTACTCAGCTCTCCCTTATGCATTAGCTCAGGTAGCAATAGAATGTATTTATGTTGCAATCCAAACATTGGCCTTTAGTCTTATCCTTTACTCAATGATTGGGTTCCTCTGGCAAGTTGACAAGTTCTTCTGGTTCTACTACTTCATATGCATGTCCTTCATCTACTTCACACTTTACGGAATGATGACTGTGGCGCTGACACCAAATCACCAAATTGCTGCAATTGTTATGTCCTTCTTTTTAGTGTTGTGGAACATATTCTCTGGTTTCCTTATTCCAAAATCGCAAATTCCAATATGGTGGAGGTGGTATTACTGGGCGTGCCCAACTTCTTGGACTATATATGGTCTATTGACATCCCAGATGGGTGACAATGATACTCCAATTGAGGTACCTGGATCTGGAACAATATCACTAAAAGCATACCTTGAGAAACAGATGGACTATAAATATAGCTTCCTTGGAGTTGCTGCAGTGGCTCAAATTGCTTTTGCTGCACTGTTTCTTTTTGTATTTGCATACGGTATCAAGTTCCTTAATTTCCAGAAGAGATAA 4320 0.4079 MEEELDADDVVRSVMSSMRMNNGSSSRRSLWSGHGDDVFERSNREDDEEHLKWAAIQRLPTFERLRKTIVKQVLESGRFNYEEIDISKLGMLEKKKLLDGVLRTVEEDNEKFLTKMRERIDRVAVEIPKVEVRFEHLYVEGDAYIGTRALPTLVNSTMNAIERVLGSIKLLPSKKSVVNILQDVSGIVKPSRMTLLLGPPGSGKTTLLQALAGKLDRDLRVSGRVTYCGHELSEFVPQRTCAYISQHNLHHGEMSVRETLDFSGRCLGVGTRHDLLVELTRREKQEGTKPDPEIDAFMKATAMEDQETSLITDYVLKILGLEICADTLVGDEMRRGISGGEKKRLTIGEMLVGPAKVFLMDEISTGLDSSTTFQIVRFLRQLVHIMDVTMIISLLQPAPETFELFDDIILLSEGQIVYQGPRENVLNFFESVGFKCPERKGVADFLQEVTSRKDQEQYWLTRDKPYHYISVPEFVAHFNNYDIGQQLCEELQVPFDRTKTHPAALVKDKYGISKLELFKACFAREWLLMKRSAFIYIFKTTQIIIMSLITMTVFLRTEMKHGQLEDGRKFYGALFFSLINVMFNGMAELAMTVFRLPVFFKQRDLLFYPAWAFALPIWIFRIPLSLLESGLWVVLTYYTVGFAPAASRFFRQLLAFFCVHQMGLTLFRFIAGLGRTVIVASTIGTFILLLVFILGGFVIARDDIEPWMIWGYYASPMMYGQNAIVINEFLDKRWSAPNMDPRIPEPTVGKALLRARGMFTEDYWYWICIGALLGFSLFFNICFIVALTFLNPFGDSKSIVVEEENDMAERNTSESSIPKADTTTTKSGMVLPFRPLSLAFDHVNYYINMPTEMKKQGVEESRLQLLRDVSGAFRPGVLTALVGVTGAGKTTLMDVLAGRKTGGYIEGSISLSGFPKKQETFARISGYCEQNDIHSPNVTVYESIVFSAWLRLGKEVKRERQKMFIEEVMKLVELHPVRNFLVGLPGIDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELLLMKRGGQIIYSGPLGQHSQKLIEYFEAIPGVPRIKDGYNPATWMLEISSPAVESQLSVDFAELYTKSELYQRNQELIKELSTPLQGTKDLNFATQYSQSFITQCKACFWKQRSSYWKNPQYNAIRFFLSISAGVIFGLIFWKKGDKIQTEQELMNLMGAMYTAIFFVGSLNTNSVQPVVAIERMVYYREKAAGMYSALPYALAQVAIECIYVAIQTLAFSLILYSMIGFLWQVDKFFWFYYFICMSFIYFTLYGMMTVALTPNHQIAAIVMSFFLVLWNIFSGFLIPKSQIPIWWRWYYWACPTSWTIYGLLTSQMGDNDTPIEVPGSGTISLKAYLEKQMDYKYSFLGVAAVAQIAFAALFLFVFAYGIKFLNFQKR 1439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi480g00005 1439 SMART AAA_5 875 1067 IPR003593 GO:0016887
Gabi480g00005 1439 SMART AAA_5 190 415 IPR003593 GO:0016887
Gabi480g00005 1439 Gene3D - 852 1088 IPR027417 -
Gabi480g00005 1439 Pfam ABC-2 type transporter 1163 1376 IPR013525 GO:0016020|GO:0140359
Gabi480g00005 1439 Pfam ABC-2 type transporter 517 729 IPR013525 GO:0016020|GO:0140359
Gabi480g00005 1439 Pfam ABC transporter 866 1018 IPR003439 GO:0005524
Gabi480g00005 1439 Pfam ABC transporter 181 363 IPR003439 GO:0005524
Gabi480g00005 1439 ProSitePatterns ABC transporters family signature. 337 351 IPR017871 GO:0005524|GO:0016887
Gabi480g00005 1439 FunFam ABC transporter G family member 34 168 472 - -
Gabi480g00005 1439 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 16 1439 - -
Gabi480g00005 1439 Pfam ABC-2 type transporter 1047 1118 IPR043926 GO:0140359
Gabi480g00005 1439 Pfam ABC-2 type transporter 396 448 IPR043926 GO:0140359
Gabi480g00005 1439 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 838 1091 IPR003439 GO:0005524
Gabi480g00005 1439 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 165 438 IPR003439 GO:0005524
Gabi480g00005 1439 Pfam Plant PDR ABC transporter associated 742 800 IPR013581 -
Gabi480g00005 1439 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 862 1078 IPR027417 -
Gabi480g00005 1439 CDD ABCG_PDR_domain2 835 1073 IPR034003 -
Gabi480g00005 1439 FunFam ABC transporter G family member 40 852 1082 - -
Gabi480g00005 1439 Gene3D - 167 469 IPR027417 -
Gabi480g00005 1439 Pfam ABC-transporter N-terminal 105 155 IPR029481 -
Gabi480g00005 1439 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 438 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi480g00005 Gabi-Chr480 11682 26992 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi480g00005 863 1050 Calmodulin-binding Proteins AT2G36910 27.094 2.67e-07 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi480g00005 K08711 - gmx:100786666 2395.54