Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi480g00001 ATGATATTTCTTAACAGTCTATTTGACTACCTATCCCTTCTTATTATTTGGAAGTGGGTCACTGGTTCTCAAGCTGATTTGTACCATGTAATGATCTACATGTTCCTGAGCCCGACAGATGATTTGGGTGAAAACCAACTCTTTGTTGGTCAGAAAAATCTGCAGCTTGTGCTTTTGCTTCTAGCTGTTGTCGCTGTGCCTTGGATGCTTTTGCCAAAACCTTTTATTTTGAAGAAGCAACATCAAGATAGGCATGGAGTTGAATCCTATATACCACTCGAAAGCACAGAGGAGAGCTTGCAAGTGGAGGCAAGTCATGATTCTCATGTTCATAAGGAATTTGATTTCAGTGAAATCTTTGTACATCAACTCATTCACACCATAGAATTTGTACTTGGAGCAGTGTCTAATACAGCTTCTTACCTTCGTCTGTGGGCCCTTAGTCTTGCTCATTCAGAGTTATCAAGTGTTTTTTTAATGTTCTCTTGCATTTCTATTCTACTTGATGCTAAGGGATTTTCTCATATACCCTGGAGATTTCGGGATAAGAAAGAGGCTGTGGAACCCGAGGCAGACCCAGAAAGGGATCAGAGATCTGTTTTTGCTTACTAG 612 0.4036 MIFLNSLFDYLSLLIIWKWVTGSQADLYHVMIYMFLSPTDDLGENQLFVGQKNLQLVLLLLAVVAVPWMLLPKPFILKKQHQDRHGVESYIPLESTEESLQVEASHDSHVHKEFDFSEIFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFLMFSCISILLDAKGFSHIPWRFRDKKEAVEPEADPERDQRSVFAY 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi480g00001 203 Pfam V-type ATPase 116kDa subunit family 1 161 IPR002490 GO:0033179|GO:0046961|GO:1902600
Gabi480g00001 203 PANTHER VACUOLAR PROTON ATPASES 1 164 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi480g00001 Gabi-Chr480 1774 3175 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi480g00001 1 176 Primary Pumps ATPases(2) AT2G21410 73.864 5.67e-81 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi480g00001 K02154 - lja:Lj3g3v0129330.1 272.707