Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4802g00001 ATGGTTTCTCTGACGGGAAAATCTAGAGTGGGTTCAACTCGAGCCTCTATAGGTGGCCAATCTCGTCCCAGTGTGGGTGGTAGGAATTTCAAAGTTTTTTCGGAAAATGACCGGAGTAATGTCGGTGATGGGCTCATGAAATCTGCAAGAGAAGCAGGTGCAACTTTAAGGAGTGCTATAGTAGCTAACAAAGGTGTTATTCCGAATAGCTCCAGTAATCCAAAGGGTGGTTTCAAAAGTATGAAGAAAAGTAGTGGCAAATATGGTACTTCTGGTAATGCAAATTTAAATGTGAGAAAGGCATTGGCTGATGTTAGCAATGTTCAAGGAAACTCTGCAACAGATATTCGGCGCCATAGCTCCAAAATGAAGTTTTCAGCTGGTTCAAGCACTAAAATAGTTGGTGTCTCTTTGAGGAAATCCTTCACAGAAAGAGTGCAAACAAATACAAGTCAAGCTCATGTTCAGTTTGATGCTCCCAAAAGAGTTGGCACAAATTTGAGGGCATCTTTAGATGATCAGAAGAATAATACAAATGGAGGTCAATCAGTTGTCACAAATAACAGGTTTGCAAGGAAGCCTGTATTACCTACAACTACAAGCACTTCAAGGAAGTCTTTACCAGTACCAAGGAGGGTTAGCAGGGCAGATATCAGTAACACAAAGGAAAATGCTAGAAGTTCTGAAACAGCAAAAGGGCAAAGTGGTCTCCCCAGTAAGCCAACAGCAGACAGAAGAGCTAGTTCCCAATTAATTAATGCAAGAAGCCTTGTCTGGAAGACTCAAGTGAGTGATGGCTTTGTTCAAATGGGTCAAACTAACGTTTTACATACTTCCTCAAGGAAGTCCACCAAGCCTACTGTAAAGATCACACTCAAGGCTTCTACCACTCAAAGGACTATAAAATCTAAATCAAGATCAGGTCAGATCAAATCAAAACCAAATGCTGCAATGTCATCGAAGGATGAAGAAACAGATTCTTTGTCTCTTCCTGAGAATGGTTTAGCGATAATTTCTGATGATGCAAGTAAAAGGCATCCTCCTTCTGATGGAAAGAGTAACCTGAGAACAGATTTGTCAGACTTCATTCCAAGGAAAAAGTCCACCCGCCGAAAATCTTATACAACTTCATTAATGGAAAGATCTAAGTTTCTCAAGGAAAGTGGTGAAGTTAGGGAGCAGGATAACCTACCAAATATAGATAATGAATGCAATCAACTAGAAGTCTCTGAATATATTGATGAGATATATCAGTACTATTGGATTACCGAGGCACTTAATCCAGCTTTGACAAATTACATGTCAACTCAGACAGACATCACACCTAATATGCGGGGCATATTGATCAACTGGCTAATTGAAGTACACTTTAAATTTGATTTGATGCCAGAAACACTGTATCTCACAGTTACATTGTTGGATCAATACCTTTCCCTAGTGACTATCAAAAAGACTGATATGCAGTTAGTCGGTCTTACGGCACTTTTGTTGGCTTCAAAGTATGAGGATTTTTGGCATCCTAGGGTCGAAGATTTAACAAGCATCTCAGCTGAGTCATATACCAGAGATCAAGTGCTTGGAATGGAGAAGCTTATTCTTAGAAAATTGAAGTTCCGTCTTAATACTCCTACTCCTTACGTTTTTTTGGTGAGGTTTCTCAAGGCTTCACAATCTGATAAGAAGCTTGAACACATGGCATTCTTTCTCATTGACCTATGCTTAGTTGAGTATGAAGCTTTAGCATTCAAGTCTTCCTTACTATGTGCATCAGCTCTCTATGTTGCACGTTGTACTCTGCAAAAAACCCCACCATGGACCCCTCTCCTTCACAAGCATGCGCGTTATAAAGTTTCACAGATCAGGGATTGTGCGGATATGATATTGAAATTCCATAAAGCTTCCGGGGTGGGAAAGTTAAAGGTTACACATGAAAAGTACTCCAGACAGGAACTCAGTAGGGTTGCAGCAGTGAAACCGTTGGATAGGCTACCCCTGTGA 1998 0.4049 MVSLTGKSRVGSTRASIGGQSRPSVGGRNFKVFSENDRSNVGDGLMKSAREAGATLRSAIVANKGVIPNSSSNPKGGFKSMKKSSGKYGTSGNANLNVRKALADVSNVQGNSATDIRRHSSKMKFSAGSSTKIVGVSLRKSFTERVQTNTSQAHVQFDAPKRVGTNLRASLDDQKNNTNGGQSVVTNNRFARKPVLPTTTSTSRKSLPVPRRVSRADISNTKENARSSETAKGQSGLPSKPTADRRASSQLINARSLVWKTQVSDGFVQMGQTNVLHTSSRKSTKPTVKITLKASTTQRTIKSKSRSGQIKSKPNAAMSSKDEETDSLSLPENGLAIISDDASKRHPPSDGKSNLRTDLSDFIPRKKSTRRKSYTTSLMERSKFLKESGEVREQDNLPNIDNECNQLEVSEYIDEIYQYYWITEALNPALTNYMSTQTDITPNMRGILINWLIEVHFKFDLMPETLYLTVTLLDQYLSLVTIKKTDMQLVGLTALLLASKYEDFWHPRVEDLTSISAESYTRDQVLGMEKLILRKLKFRLNTPTPYVFLVRFLKASQSDKKLEHMAFFLIDLCLVEYEALAFKSSLLCASALYVARCTLQKTPPWTPLLHKHARYKVSQIRDCADMILKFHKASGVGKLKVTHEKYSRQELSRVAAVKPLDRLPL 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4802g00001 665 MobiDBLite consensus disorder prediction 170 248 - -
Gabi4802g00001 665 CDD CYCLIN_AtCycB-like_rpt2 543 659 - -
Gabi4802g00001 665 Gene3D - 430 535 - -
Gabi4802g00001 665 Pfam Cyclin, N-terminal domain 415 541 IPR006671 -
Gabi4802g00001 665 MobiDBLite consensus disorder prediction 276 316 - -
Gabi4802g00001 665 MobiDBLite consensus disorder prediction 67 91 - -
Gabi4802g00001 665 MobiDBLite consensus disorder prediction 1 44 - -
Gabi4802g00001 665 PANTHER CYCLINS 367 646 IPR039361 -
Gabi4802g00001 665 MobiDBLite consensus disorder prediction 220 248 - -
Gabi4802g00001 665 CDD CYCLIN_CCNB1-like_rpt1 409 538 - -
Gabi4802g00001 665 SMART cyclin_7 547 629 IPR013763 -
Gabi4802g00001 665 SMART cyclin_7 450 534 IPR013763 -
Gabi4802g00001 665 FunFam Cyclin N-terminal domain containing 2 430 538 - -
Gabi4802g00001 665 FunFam putative cyclin-B3-1 isoform X3 539 664 - -
Gabi4802g00001 665 MobiDBLite consensus disorder prediction 276 359 - -
Gabi4802g00001 665 MobiDBLite consensus disorder prediction 1 23 - -
Gabi4802g00001 665 Gene3D - 536 663 - -
Gabi4802g00001 665 MobiDBLite consensus disorder prediction 170 208 - -
Gabi4802g00001 665 SMART Cyclin_C_2 543 660 IPR004367 -
Gabi4802g00001 665 SUPERFAMILY Cyclin-like 405 541 IPR036915 -
Gabi4802g00001 665 SUPERFAMILY Cyclin-like 543 662 IPR036915 -
Gabi4802g00001 665 Pfam Cyclin, C-terminal domain 543 658 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4802g00001 Gabi-Chr4802 22914 31847 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4802g00001 25 665 Core Cell Cycle Gene Families AT1G16330 44.175 2.51e-173 507
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4802g00001 K21777 - gmx:100808850 891.338