Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi47g00015 ATGTCTGGTGTCTCCTTAAAAATGCTTTCGCCGTTGGTTTCTTGGATCTTGTCGCCCTCCTCCTCTTCCTCCTCCTCATCAGAAGAAGAAAGCCTTGACATTATCACTGACGAATCAGACTATGAAAACGATAATATAATCGAGAACGACAAAGTGGAAGATGACGAGAAAGACCATAACGACAATGCAGAAGACGACGAGAATGACCATTTTCTCAGTTCCTGCGATGTCCATGACACCATTCCTCTTGCGCTCCCCGTTCCCAATGGCTCCCCCGCCGTGACGGTGGCCTTCCCCGGGGCCATCACCGCCACCCCTATGGTAACACGCTCAAAACGACAGCGCACCACCAACTATTCTGGCACCGTGAGACAATATCAGAGGCTATGGACGAAGGATGACGAAATGGAACTGTTGAAGGGATATCTGGATTACATCAACCAGAACCGAAGAGCAACCACCTCTCTCCAAAATGATGTAGCTTCGTTGTACGATCACTTGAAGCCCAAACTGAACGTGGATTTCAACAGGAACCAGCTTGTTGAGAAGCTGCGTAGGTTAAAGAGAAAACACAAGATGGCTTTGGACAAAGGCAAGGAGGTTCCTTTCAAAAACCTCCACGAACAGACTATTTTCGAAATTTCCCACAGGATTTGGGGCAATGACATAGACACAGATTGTTTGAATGGTGATGAATCACCCATTCCTGAAAGTCATGTTAAGGTGAAGACTGAACAAGTTGACAATTGTGATGAAATAGACAATAGGGTGCCAAAGCGGTCGCGGTTAAGCACAGATGATTTGAACAGAACAAATGACCAGAACAATGGTGATACAGATACTACTAGTAGCATACAGGGCTTCATTGAAGAAACTATGACGTCCTGTTTCTCACCATTGCTGAAGGAACTGTTGGATGATGCACGGGAAGGGACACTTGGCGAGTTAGCACCGATCCCAATGCCATTATGCCCTGGGGAAGAAGGCAATGAGCAAAGGAGAAAGCGTAGGATTTTGGAGCTGGAGGTGTATTTGAATAGGTTGGAGTTGTTGCAGGATCAGATCAAGGCTAGGTTAGAGGAGCTGCGGTCTAGCTGA 1098 0.4672 MSGVSLKMLSPLVSWILSPSSSSSSSSEEESLDIITDESDYENDNIIENDKVEDDEKDHNDNAEDDENDHFLSSCDVHDTIPLALPVPNGSPAVTVAFPGAITATPMVTRSKRQRTTNYSGTVRQYQRLWTKDDEMELLKGYLDYINQNRRATTSLQNDVASLYDHLKPKLNVDFNRNQLVEKLRRLKRKHKMALDKGKEVPFKNLHEQTIFEISHRIWGNDIDTDCLNGDESPIPESHVKVKTEQVDNCDEIDNRVPKRSRLSTDDLNRTNDQNNGDTDTTSSIQGFIEETMTSCFSPLLKELLDDAREGTLGELAPIPMPLCPGEEGNEQRRKRRILELEVYLNRLELLQDQIKARLEELRSS 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi47g00015 365 Coils Coil 341 365 - -
Gabi47g00015 365 MobiDBLite consensus disorder prediction 50 73 - -
Gabi47g00015 365 PANTHER BNAANNG10740D PROTEIN-RELATED 20 361 IPR007592 GO:0006355
Gabi47g00015 365 Coils Coil 49 69 - -
Gabi47g00015 365 MobiDBLite consensus disorder prediction 268 282 - -
Gabi47g00015 365 MobiDBLite consensus disorder prediction 31 49 - -
Gabi47g00015 365 MobiDBLite consensus disorder prediction 251 267 - -
Gabi47g00015 365 MobiDBLite consensus disorder prediction 251 282 - -
Gabi47g00015 365 Pfam Protein of unknown function, DUF573 127 220 IPR007592 GO:0006355
Gabi47g00015 365 Coils Coil 177 197 - -
Gabi47g00015 365 MobiDBLite consensus disorder prediction 17 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi47g00015 Gabi-Chr47 73257 74354 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi47g00015 91 364 GeBP Transcription Factor Family AT5G28040 33.239 4.51e-42 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Gabi47g00015 DUF573 2.2e-24 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi47g00015 - - gmx:102662842 423.32