Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi47g00014 ATGGCATCCGAGCCAAACGATGCAATTTTCCCCGAAGAAGATCTCGACGACGACGACGAAACTCTAGAGGAGGAGGAGGAAGACGACGACGACGACGATTTAGGGGAACCAGAAGACGACCAACAAACCGAACCTTCTGCTTCCGCCCTCGCGGTGCCCTGGTCCGCCGTCTCAAACGGCGAAAACGCGTCGATTCCGATGGCCACAATTGTCGTCGCCGACTCCTCTGAGCCAAAACGGCAGCGGACGGAGCAAATCGAAGAGAAGAAGGCGTTGGACGATTCGCGAAGACTGTTCCAGCGTCTTTGGACGGACGAGGACGAGATCGGGCTGTTGCAGGGGTTCCTGGAGTACACGGCACAACGAGGATCCTCGCACCACAACGACACCGCTCTGTTCTACGATCAAATCAAGTCAAAGCTTCAGCTCGGTTTCAACAAGAACCAGCTCGTCGAGAAGCTGCGGAGATTGAAGAAGAAGTACCGCAACGTTATCGACAAAATCAGCTCCGGCAAGGAGTTTTCCTTCAAGAGCCCTCACGATCAAGCTACATTCGAAATCTCGCGCAAGATCTGGAGCAACACGGTTCCAGTCGCCGGTGCCGTCGAAGATGACGACGAAATCAAGCCTCACTCTAACCCTAACCGTAATTTCGGTAATTCAATGTCGTGGAAGAATGAGGCGACGACGGAGAAGAAAACCCCGCCGCGGAAGCGGTCACGGTCTCGATCGGGGATGAAAACGGAGGAGAAGAAGAATGATGGTTCAGCGTTGAACAAAGATAATAATTGTATATGCAATAATAATAATGATGATGATAATTACAATCATAACAATAATAATACCAATAATTACAAAAGTAGTTATAGCAATAACATACAGGGTTTGATTGAAGAGAAGGTGAGAAGTTGTTTGTCGCCAGTGTTGAAGGAGTTGGTGAGTAGTGCCATGGGAAGAGGGTTTGGAGTATTGAATCCCATTCCCATGCCGTCGAATTTATTGACTTTGGGGATTGGGGAAGTGGTTGTAGATGATGACAAGTGGAGGAAGCAACAGATTTTGGAGCTGGAAGTGTATTCCAAGCGTTTGAAACTGGCCCAGGATGAGATCAAGGTTACTCTGGAGGAGTTGCGATCAGTTGATGCTGGAAGATGA 1155 0.4918 MASEPNDAIFPEEDLDDDDETLEEEEEDDDDDDLGEPEDDQQTEPSASALAVPWSAVSNGENASIPMATIVVADSSEPKRQRTEQIEEKKALDDSRRLFQRLWTDEDEIGLLQGFLEYTAQRGSSHHNDTALFYDQIKSKLQLGFNKNQLVEKLRRLKKKYRNVIDKISSGKEFSFKSPHDQATFEISRKIWSNTVPVAGAVEDDDEIKPHSNPNRNFGNSMSWKNEATTEKKTPPRKRSRSRSGMKTEEKKNDGSALNKDNNCICNNNNDDDNYNHNNNNTNNYKSSYSNNIQGLIEEKVRSCLSPVLKELVSSAMGRGFGVLNPIPMPSNLLTLGIGEVVVDDDKWRKQQILELEVYSKRLKLAQDEIKVTLEELRSVDAGR 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi47g00014 384 MobiDBLite consensus disorder prediction 242 257 - -
Gabi47g00014 384 Coils Coil 147 167 - -
Gabi47g00014 384 MobiDBLite consensus disorder prediction 41 55 - -
Gabi47g00014 384 PANTHER BNAANNG10740D PROTEIN-RELATED 18 376 IPR007592 GO:0006355
Gabi47g00014 384 MobiDBLite consensus disorder prediction 9 40 - -
Gabi47g00014 384 MobiDBLite consensus disorder prediction 202 262 - -
Gabi47g00014 384 Coils Coil 349 376 - -
Gabi47g00014 384 MobiDBLite consensus disorder prediction 1 55 - -
Gabi47g00014 384 MobiDBLite consensus disorder prediction 213 229 - -
Gabi47g00014 384 Pfam Protein of unknown function, DUF573 99 193 IPR007592 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi47g00014 Gabi-Chr47 69092 70548 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi47g00014 43 383 GeBP Transcription Factor Family AT5G28040 46.757 1.83e-86 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Gabi47g00014 DUF573 1.1e-33 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi47g00014 - - gmx:100790030 372.474