Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4796g00018 ATGCCGTCATGGTGGGGAAAATCTTCCTCCAAAGAAGTGAAGAGGAAGCCAAATAGGGAAAGTATTCTTGATACACTACTGCAGAAATCAAAGAATGCTTCTGAAGACAAGTGCAATGATAAACCAGGAGGATCTAGGAGACATCGAAGGGACACTATCTCAGAAAAGGGATCTAGATCCATCATACCTTCAAGATCACCATCACCCAATACACATGTGTCTTGCTGTCAAAATTTTGCAGAAAGGCCTCATCCTCGGGCACTCCCATTGCCATGCTTTCACCTTCCTACTGTCAGTGATACAAATTCGGAATTTAGTTTAGCATCAAAACTGGAAAAAGCCAGAGGCTCTAAGCCATCTAATTTTCCCCTACCAAAACCTGTTTATATATCTAACAGGGGAGAACCCAAAGATGAAGAGGGAGATACCGCCGCTGCATCTGTTTATAGTGGCAGCTCAATTGATAGTGATAACTTGTCTGATTTGCATCTTGTTAGTACTCTGGCATCTGACTTTGAAAATGGAAACATAGCCACCATTAACAATTCTTCCAGTGTTGTGCACAAGGATCGATCACCTAGTACTATTCAGAGAAACTCAAGAGCATCCTCAAAACCAGCTCCTTTGCATCTGCAAATAGCTCGACCAGGTGGTTTATGTAGTGCTCCAGATAGTTCAAAGTCAAGTCCTTCTAGCAATCGAATGAGAGCATGTGGTCCTGAGCAAGTGTTGAACACCGGATTCTGGACAGCAAAGCCTTATCCAGATATAGCTTCTGGGCACTACTATAGTCCCAGTTCAGGCCATAATTCTGGTCAAAATTCAGTTGGTGGGGATCTGTCAGGACAGACATTTCAGCAGCATAAAAGGTGCAGCGCTGAATGTTCCCCAATACCCAGTCCCAGAATGACAAGCCCTGGCCCCAGTTCCAGGATACATAGCGGTGATGTTTCCCCTCTACATCCACGAGCTGGAGTTGCAGCTGCAGAATTGCCTACAAGACGTCCTGACAATGTGAAACAACAAACTCATAGGTTACCCCTTCCTCCAATAACAGTCAATAATTGTTGTCCATTTTCTCCAACATATTCTGCAACTCCATCAGCCCCTCACAGTCCTGGCAGTGCAGAAAATCCAACAAGCCCAGGTTCACGCTGGACAAAGGGGCAGCTGCTTGGAAGGGGAACGTTTGGACATGTATATCTTGGTTTTAACAGAGAAAGTGGTGAAATGTGTGCCATGAAGGAGGTAACCCTTGTTTCAGATGATGCTAAATCAAAGGAATGTGCGCGGCAACTTGGCCAAGAAATTGCACTCCTAAGTCAGTTACGGCATCCAAATATTGTCCGGTATTATGGATCTGAGATGATAGATGACAAACTTTATATATACTTGGAGTATGTCTCTGGTGGGTCTATCTATAAACTGGTTCAGGAGTATGGCCAGTTAGGTGAAATTGCCATTCGTAATTATACTCGGCAAATTCTGTCAGGACTTGCATATTTGCATGCTAAGAACACAGTTCACAGGGACATTAAAGGAGCAAACATATTGGTGGACCCTAATGGGTGGATAAAATTGGCAGATTTTGGGATGGCAAAGCATATTAGCGGGACACCTTGTCCATTTTCTTTCAAAGGAAGTCCTTACTGGATGGCACCTGAGGTTTTAAAAAATCCAAATGGTTGTAATCTAGCTGTTGATATATGGAGTCTGGGTTGCACTGTTTTGGAGATGGCAACCACAAAGCCTCCTTGGAGCCAGTACGAAGGGGTTGCTGCTATGTTTAAGATTGGGAATACCATGGAACTTCCTACAATTCCAGATCATCTATCAGAAGATGGAAAAGATTTTGTCAGACATTGTTTGCAAAGGAATCCACTAAATCGCCCCTCAGCGGCTCAACTTCTACAGCATCCGTTTGTTAAAAATGTTTCGCTGGAAAGACCCATTCTGACTGCAGATCCTTTGGAAGCACCACCTGCTGTTATAAATGCACTGAGATCTCTGGCCATTGGACCTGCAAAACATAATTTATGCTTAGACTCAGAAGTGGCTGGTATCTATCCGCCTAGAAGCTTGAGAACTGGTTCTGGATCGAGCGACGCCCATACACCAATGAACATCCCATGTCCCGTTTCTCCCTCCTGTAGCCCTCATTTTCCTTCTAGATCATTGCATGTGACTGCAAGGATGTCTCCCTCTCCAATAGCTAGTCCTCATGGTGCATCTGGCACATCTACACTGCTCACCAGTGGGGGTGATGCAATCCCATTTCATCAAACAAAGCAACCATCATTCCCATGTGAAGCAGTGAGTATGACTCAAAGGTCTCAGAATGATTTTTATTCAAATGTAAGCACTGCTTATCAGGGTTCAAAGCATGATCAGTTTAGGAGAAATAGACGAGGTACTCATGCTTGCCGGGATGTAATGTCATCTGATAATGATGCCCGTGCAAGCCATGATGTGAAGGCTGTCCAGGGTGGCCCTAGAGAAATTCATGACCAGAAGTCAAATTTGGCTGATTGTTTGTCGCACCAGGTGTTGAGGGATTATACAAAGCTAAATACATCCCGGGATGTTAAGCCGGGTGCCCCTATGCTTGGTCGCATAAATGGCATTTAA 2628 0.4437 MPSWWGKSSSKEVKRKPNRESILDTLLQKSKNASEDKCNDKPGGSRRHRRDTISEKGSRSIIPSRSPSPNTHVSCCQNFAERPHPRALPLPCFHLPTVSDTNSEFSLASKLEKARGSKPSNFPLPKPVYISNRGEPKDEEGDTAAASVYSGSSIDSDNLSDLHLVSTLASDFENGNIATINNSSSVVHKDRSPSTIQRNSRASSKPAPLHLQIARPGGLCSAPDSSKSSPSSNRMRACGPEQVLNTGFWTAKPYPDIASGHYYSPSSGHNSGQNSVGGDLSGQTFQQHKRCSAECSPIPSPRMTSPGPSSRIHSGDVSPLHPRAGVAAAELPTRRPDNVKQQTHRLPLPPITVNNCCPFSPTYSATPSAPHSPGSAENPTSPGSRWTKGQLLGRGTFGHVYLGFNRESGEMCAMKEVTLVSDDAKSKECARQLGQEIALLSQLRHPNIVRYYGSEMIDDKLYIYLEYVSGGSIYKLVQEYGQLGEIAIRNYTRQILSGLAYLHAKNTVHRDIKGANILVDPNGWIKLADFGMAKHISGTPCPFSFKGSPYWMAPEVLKNPNGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNTMELPTIPDHLSEDGKDFVRHCLQRNPLNRPSAAQLLQHPFVKNVSLERPILTADPLEAPPAVINALRSLAIGPAKHNLCLDSEVAGIYPPRSLRTGSGSSDAHTPMNIPCPVSPSCSPHFPSRSLHVTARMSPSPIASPHGASGTSTLLTSGGDAIPFHQTKQPSFPCEAVSMTQRSQNDFYSNVSTAYQGSKHDQFRRNRRGTHACRDVMSSDNDARASHDVKAVQGGPREIHDQKSNLADCLSHQVLRDYTKLNTSRDVKPGAPMLGRINGI 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4796g00018 875 MobiDBLite consensus disorder prediction 112 152 - -
Gabi4796g00018 875 ProSitePatterns Protein kinases ATP-binding region signature. 392 415 IPR017441 GO:0005524
Gabi4796g00018 875 MobiDBLite consensus disorder prediction 265 293 - -
Gabi4796g00018 875 Gene3D Transferase(Phosphotransferase) domain 1 384 657 - -
Gabi4796g00018 875 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 64 650 - -
Gabi4796g00018 875 MobiDBLite consensus disorder prediction 265 321 - -
Gabi4796g00018 875 MobiDBLite consensus disorder prediction 364 387 - -
Gabi4796g00018 875 MobiDBLite consensus disorder prediction 183 238 - -
Gabi4796g00018 875 CDD STKc_MEKK1_plant 385 642 - -
Gabi4796g00018 875 MobiDBLite consensus disorder prediction 183 206 - -
Gabi4796g00018 875 FunFam Mitogen-activated protein kinase kinase kinase 384 666 - -
Gabi4796g00018 875 MobiDBLite consensus disorder prediction 1 74 - -
Gabi4796g00018 875 Pfam Protein kinase domain 387 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4796g00018 875 ProSiteProfiles Protein kinase domain profile. 386 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4796g00018 875 SMART serkin_6 386 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4796g00018 875 MobiDBLite consensus disorder prediction 57 74 - -
Gabi4796g00018 875 MobiDBLite consensus disorder prediction 222 238 - -
Gabi4796g00018 875 MobiDBLite consensus disorder prediction 30 56 - -
Gabi4796g00018 875 MobiDBLite consensus disorder prediction 364 389 - -
Gabi4796g00018 875 SUPERFAMILY Protein kinase-like (PK-like) 384 725 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4796g00018 Gabi-Chr4796 107198 112383 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4796g00018 1 873 MAP Kinase Kinase Kinase AT1G63700 55.494 0.0 832
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Gabi4796g00018 Pkinase 4.2e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4796g00018 K20717 - gmx:100814422 1119.38