Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4796g00008 ATGGTTTCAGGTAACCAACTTGCATCTGTGGTGAAGTGGATGAATGCTGTGCTTCCTAACTTTAATTTGCCTTTAGAAACTTCAGAGGAGGATTTGAGGTTATTGTTGAGGGATGGATCTGTATTATGCAGCATTTTGGACAAGCTGGTTCCTGGTTCAGTGGAGGGAAGTGGTTCATTGAATGAGCCAGTGAGTGTTAAAAGGTTTCTGCTGGCTTTGGATGAGTTGGGATTGTCTGGATTTGAATTGTCAGACCTGGAGCAGGGATCCATGGCTCCTGTGTTGCAGTGCCTTGAGATTTTGAAAACTCATTTTGCTTTTAATGCTGCACGAGAAAATATCCAAAGTTGGTCTAGAAAGAGGTGGGATGAGTCGGATCTAACATCCCTAGAGGAAACTGATAGTTTCCTCAAGGATGCTTCAAAATTCCAATACGCAGTTGATGGTTCTGTTGTATCAGATGGAATTGCTTCTATAGATCATACTGGATTAAAGTCTAATGAACCGTTCCAGTTGAAGCGAGGATTGCATGTGGATCTTTTAGATGCTAAACTTAATGAATTATTAAAATCAAACAGTTTGGATAGTGCCTCAACTCAGTCACTTTTTTGCATAGGAAATAGGATCCTAAGCGATATCTTTGAAAGGAAGAATGGAGATGTACCTCAACGTGCCGCATGCCTGTTGAGGAAAATTCTGCAAGTAATTGAGTTGCGCGTTTCAAATCAAGCAGAAGGCTTGAAAAATCAAAACAATCTTTTCAAGGCTCGTGAGGGAAAGTACCAATCAAGAATAAATGCACTTGAAACTCTGGCAGTAGGGACGACAGAAGAGAATGAGGTTGTTACAGGTTGGGTTCAGCAATTGAAGCGTGAACAAACCAAATTTGAGGAGAAGAAGAAACTTGAAGAGCAGGATTTTTCTCGATTAAAGAAAGACAAAGTTCGTAATGAAATTGAACTTTCTTCACTGAAGCAGGAAATGGAAATGGCCAAAAGAACACATGAAGAACATGTTTCGCAATTAGAATTGCAAGCAACTGAATCCAAAGCTGAATATGAGAAAAGGATAGAGGAACTTAAGCGTCATCTTGCTAATGCAAGGAAGCAAGTGAAGGAACTGGAGGCATTTTCAGAATCCAGATCTTTGAATTGGAAGAATAAAGAGCATACTTATCAAAGTTTTGTCAATTACCAATTTGGAGCTTTCCAGGAATTGAGAGCTGCAATGAAGTCTGTCAAAAATGAAGTGATAAAAACAAAAAGAAGCTACTTAGAGGAATTCAAGTACTTTGGAACCAAGCTCAAAGGTCTAGCTGAGGCTGCTGAAAATTATCATGTAGTTCTAGCAGAAAATCGGAAATTGTATAATGAAGTTCAAGATTTGAAAGGAAATATCAGGGTATATTGTCGAATTAGACCATTTCTTCAGGGACAAAGTCAAAACCATACAACAATTGAGTTTGTTGGTGATGATGGAGAATTAGTTATTAGCAATCCTCTTAAACAAGGAAAAGAAAGTCGCAAGCTTTTTAAATTTAATAAGGTTTTTGGTCAAGCATCAAGTCAAGAGGAAGTATTCATGGACACTCAACCTCTAATTCGTTCTGTTCTTGATGGGTACAATGTTTGTATATTTGCTTATGGTCAAACTGGCTCAGGAAAGACGTATACGATGAGTGGACCTTCCCAATCAACAAAATCAGATTGGGGAGTCAACTATCGGGCACTTCATGATCTTTTCCATTTCTCCCAAAGTAGGAGAAGCTCTATTGTTTATGAAGTTGGAGTTCAAATGGTTGAAATTTATAACGAACAAGTTCGTGATTTACTATCAAGCAATGGTCCACAAAAGAGACTTGGGATTTGGAATACTGCCCAACCAAATGGGTTGGCTGTTCCTGATGCAAGTATGTATTCAGTGACTTCAATGACAGATGTCCTTGATTTGATGAATACTGGGTTGATGAATCGGGCAACTAGTGCCACGGCCTTAAATGAAAGAAGTAGCAGATCACACAGTGTTCTCTCTGTTCATGTTCGTGGAACGGATTTGAAGGCCAACACTATGTTGCGTGGATGTCTGCATCTTGTAGATCTTGCAGGAAGTGAAAGAGTGGATCGTTCTGAAGCAACTGGAGATAGGCTTAAGGAGGCTCAACATATAAATAAATCGCTATCCGCACTTGGAGATGTGATATTTGCTCTAGCGCAAAAGAGTCCACATGTGCCGTATAGAAATAGTAAATTGACTCAACTTCTTCAGAGTTCGTTAGGTGGTCAAGCGAAAACCCTTATGTTTGTACAGCTTAATCCTGATGTTGCTTCATATTCTGAAACTATAAGCACCTTGAAGTTTGCTGAGAGGGTTTCTGGTGTTGAGTTAGGCGCTGCTCGTAGCAACAAAGAGGGAAGGGATGTGAGAGAACTTATGGAGCAGTTGGCATCTCTCAAGGATGCAATTGCTAGGAAGGATGAAGAGATTGAGCAGTTGCAGTTGCTCAAGGCTAATCACAATGGTTCAAAGCTTGGTATGATCTCACGAAGGCATGGGTCATCATCTCCAAGGAGACATTCCATAGGGACTCCCCGACATAGGGTGAGACTTTCCGGAACAAGGAGCTTTGGAGTCAATGAAAAAGCAGCTTCTGACGTGGATAACTGCTCAGAGTATAGTGATAAGCATTCAGAAGCCGGTTCTCATCAATCAATGGATGATTTCAGGAACAAGTCCAGTTCCCTACGGTTGAAATTAGCTAGAGAAGATATCAGTCAAAATGTCAATGAGGATGTTGAACTCTTAAGATTTGGAGATGCAGATTCGGAGGAGAGATTAAGTGACATATCTGATGGTGGTCTTTCAATGGGAACAGAAACTGATGGTTCAATCAGCAGTATTGTGGAATACACTCTTTTCCCTGAACTTGAGAAGGCAGACGAGACCACACCAACAGCTAACAAGAGAACAGCCGACAACCTTCCAGCTGAGAGCACGGAAAAGGCCATTATGCCATCCAAAATTCCCAAAGCTCCGCAAGTCCAGCCAAAACTGCAGAGACCATCTAGGCTATCATTGAACAGAAGCTCCTCGAAGGTTTTGTCAAGTGTTAGAAAACCCACAGCCAGTAGCTCTTCTTCGGTGAAGCCTCTCAAACGATGGCAATAG 3165 0.4092 MVSGNQLASVVKWMNAVLPNFNLPLETSEEDLRLLLRDGSVLCSILDKLVPGSVEGSGSLNEPVSVKRFLLALDELGLSGFELSDLEQGSMAPVLQCLEILKTHFAFNAARENIQSWSRKRWDESDLTSLEETDSFLKDASKFQYAVDGSVVSDGIASIDHTGLKSNEPFQLKRGLHVDLLDAKLNELLKSNSLDSASTQSLFCIGNRILSDIFERKNGDVPQRAACLLRKILQVIELRVSNQAEGLKNQNNLFKAREGKYQSRINALETLAVGTTEENEVVTGWVQQLKREQTKFEEKKKLEEQDFSRLKKDKVRNEIELSSLKQEMEMAKRTHEEHVSQLELQATESKAEYEKRIEELKRHLANARKQVKELEAFSESRSLNWKNKEHTYQSFVNYQFGAFQELRAAMKSVKNEVIKTKRSYLEEFKYFGTKLKGLAEAAENYHVVLAENRKLYNEVQDLKGNIRVYCRIRPFLQGQSQNHTTIEFVGDDGELVISNPLKQGKESRKLFKFNKVFGQASSQEEVFMDTQPLIRSVLDGYNVCIFAYGQTGSGKTYTMSGPSQSTKSDWGVNYRALHDLFHFSQSRRSSIVYEVGVQMVEIYNEQVRDLLSSNGPQKRLGIWNTAQPNGLAVPDASMYSVTSMTDVLDLMNTGLMNRATSATALNERSSRSHSVLSVHVRGTDLKANTMLRGCLHLVDLAGSERVDRSEATGDRLKEAQHINKSLSALGDVIFALAQKSPHVPYRNSKLTQLLQSSLGGQAKTLMFVQLNPDVASYSETISTLKFAERVSGVELGAARSNKEGRDVRELMEQLASLKDAIARKDEEIEQLQLLKANHNGSKLGMISRRHGSSSPRRHSIGTPRHRVRLSGTRSFGVNEKAASDVDNCSEYSDKHSEAGSHQSMDDFRNKSSSLRLKLAREDISQNVNEDVELLRFGDADSEERLSDISDGGLSMGTETDGSISSIVEYTLFPELEKADETTPTANKRTADNLPAESTEKAIMPSKIPKAPQVQPKLQRPSRLSLNRSSSKVLSSVRKPTASSSSSVKPLKRWQ 1054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4796g00008 1054 ProSiteProfiles Calponin homology (CH) domain profile. 4 106 IPR001715 GO:0005515
Gabi4796g00008 1054 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 465 831 IPR027417 -
Gabi4796g00008 1054 PRINTS Kinesin heavy chain signature 540 561 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi4796g00008 1054 PRINTS Kinesin heavy chain signature 663 680 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi4796g00008 1054 PRINTS Kinesin heavy chain signature 694 712 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi4796g00008 1054 PRINTS Kinesin heavy chain signature 743 764 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi4796g00008 1054 ProSiteProfiles Kinesin motor domain profile. 465 793 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi4796g00008 1054 MobiDBLite consensus disorder prediction 886 907 - -
Gabi4796g00008 1054 Gene3D - 3 107 IPR036872 -
Gabi4796g00008 1054 MobiDBLite consensus disorder prediction 975 1054 - -
Gabi4796g00008 1054 Coils Coil 286 377 - -
Gabi4796g00008 1054 PANTHER KINESIN-LIKE PROTEIN KLP-3 11 360 IPR027640 GO:0003777|GO:0007018
Gabi4796g00008 1054 SUPERFAMILY Calponin-homology domain, CH-domain 8 105 IPR036872 -
Gabi4796g00008 1054 Coils Coil 807 837 - -
Gabi4796g00008 1054 SMART kinesin_4 463 801 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi4796g00008 1054 MobiDBLite consensus disorder prediction 1017 1054 - -
Gabi4796g00008 1054 MobiDBLite consensus disorder prediction 841 907 - -
Gabi4796g00008 1054 FunFam p-loop containing nucleoside triphosphate hydrolases superfamily protein 407 795 - -
Gabi4796g00008 1054 Pfam Kinesin motor domain 471 791 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi4796g00008 1054 Gene3D Kinesin motor domain 406 795 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4796g00008 Gabi-Chr4796 33924 41551 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4796g00008 453 827 Calmodulin-binding Proteins AT5G65930 39.895 5.33e-73 263