Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4795g00003 ATGTCAAGCTCAAGAAGAAAGCTAGTTTTGAACACTGTGTCCGTGAACCTAGGCTGCGGAAGCTGCAGAAGACCAAAGCTTCGTTACATATTCCACCCAAAGCCAAAACCCAAGAACCCCATCTTCCAAAAACACAAGCTTTACAATAATTCTTCTTCAACACCGTGTGGTGAGGACAGAGATGACACTGCCACCACAAGCACCACCAACACCACGTTCTCTCCATTCTACGTCGAGTCATCACAGTTTTGTGTCAGAGGATTCGGAAGAGTTGGAAGCGAAGGCGTGGCCATAGAGAAAGATTCTGAAGACCCTTATATTGATTTCAAGCATTCCATGCTCCAAATGATATTGGAAAATGAGATATACTCAAAGGATGATCTTAGGGAGCTTCTGAACTGTTTTCTTCAGCTGAATTCACCGCACCACCATGGCGTTATTGTCAGAGCTTTCACTGAGATCTGGAATGGGGTCTTCTCTGTTAGGTCCAATTCCCCCAGGTTTCCCTTGACCCGTAAGTCACGTGACTTCTAG 534 0.4551 MSSSRRKLVLNTVSVNLGCGSCRRPKLRYIFHPKPKPKNPIFQKHKLYNNSSSTPCGEDRDDTATTSTTNTTFSPFYVESSQFCVRGFGRVGSEGVAIEKDSEDPYIDFKHSMLQMILENEIYSKDDLRELLNCFLQLNSPHHHGVIVRAFTEIWNGVFSVRSNSPRFPLTRKSRDF 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4795g00003 177 ProSiteProfiles OVATE domain profile. 98 157 IPR006458 -
Gabi4795g00003 177 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 68 160 IPR038933 GO:0045892
Gabi4795g00003 177 MobiDBLite consensus disorder prediction 49 68 - -
Gabi4795g00003 177 Pfam Transcriptional repressor, ovate 102 158 IPR006458 -
Gabi4795g00003 177 NCBIfam uncharacterized plant-specific domain TIGR01568 96 156 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4795g00003 Gabi-Chr4795 24036 24569 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Gabi4795g00003 Ovate 3.6e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4795g00003 - - pvu:PHAVU_007G269800g 232.646