Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4792g00003 ATGGAAGCCACTTCTATAACGCAGTTGTTGAAGGGCTTTTGTGATAATACACAATGGGAATATGCTTTTTTTTGGAAGCTTAGCCACCATTTTCCAATGACTTTGACCTGGGAAAATGGTTACCAGAAAAGAAATGAGGCTGTTGAAAGTATTTGGGGTGACATCAATTTCAAATCTCCAGATGATGTATATTCCTCAAGCGGCGAAAGCACTGATGATTCGGGAGATTATTCAGCTCGACTACTCATGAATGAAATGTCTCATCTTAAATACTGTTTGGGAGAAGGGGTTGTTGGCAAAGTAGCTCTTGCAGAGGATCATTGTTGGGTTTTCTGTGAGGATATGCTCACCAATAAATTTGACACTGATTTAATCCCTGAGTGTCCTGATGAGTGGCTTCTTCAATTTGCATCTGGCATCAAGACTATTGTGCTGGTACCAGTTCTTCCACAAGGGGTTTTGCAATTTGGTTCATTTGAAGCGGTTGCTGAAGACATGAAACTTGTTACCAATATCAAGGAGAAATTCCATTCCATTCATTGTATGGAAGCAAATACTACACCTTTGAACATGGGAACTGATGATCAAGATTGGTCATTCTCAGCACTAACCCATAATCTGATGCATTGCTTGGACGAATCATCTTCTATTGCAAATAGTGTATTGAAAGGTGAGGTTTCAGCTAGCACTGCACTCAATGCAAAGGGATCAACAAGGTTGAACCCAACAATGATATCATTTATTCAGGATGAGTGTAGCATGTCCGGAAAAAATCAGCAAAAATCCCTCAAAAGAGCAAATGAAAATGAGACCAGTTCCTCATCAATTGAGATGTCAATTGATCCAAGACATATTGGTCAGATGGAGACAAATGCAAATCATATGGAAGAAGAGATATGGACCATGTCTCATTCAGTCAACAATGATGGAGTGTTTGGAGAGATGTCAAATGGATTAGGCTCTTGCTTTGGTAAAAATATGACTCAACAACAATTTGGAGGCATTGAAACTTGTCATGATGATACAAATTGGAAAGACTTCTTCACTTTTCCCTCAGAGTCTGAATTGCACAAAGCACTTGGATCAGTTGCATTTGAACAGACAGGCAATTCTATGTCACATACAAACAGTAGCTCAACTTTGAATTTCAATAGAAAAGGGCATGATTATATTAAAGGTATGGAGTTTCCCAAAGAAGCTGATCCAGAAAATCTTTTGGATGCTGTTATTAGCAATTTATGCAGTGCCTCGGATGATACTTCAAGTATATCCAATTCTATTAGGTCTCCTATGATAGAGTTTACTGGATTCATTCGACCAAAAGTTAATTTTGAAGAAAGCTCTTTGATTGTGAACGCGAGAAGTGATATTATGCCTGCAGTTATGGTCAAGGGCAGAGATGAAGTTACTAACCGTTTTACATCAACATCTTTTGATGGGAATTCAAGCTTATTGTTTGATGAGGAATGGCAGGAAAAAATTGATAGTCATATGCAGCCTATTAGGGGACCAAAGCTCTCTAGCACAAGCAAGAAAAGAGCAAGAGTTGGTAATAGCCAAAACTCAAGGCCAAGAGATAGACAAATGATCATGGACAGGATGAAGGAGTTGAGGGAACTTGTCCCAGATGGTGGTAAGGGTAGCATTGACAACCTATTGGAACGGACCATAAAGCACATGATGTACTTGAGAAAGATAACAAGCCAGGCTGAGAAACTGAAACAATTTTCACATTGTGAGGTTTCTGAGTGCAAAAAACAGAAAATCAATGGAGGCCATCCAGGAAGGACATGTGCATTTGACTTTGATAATGAACTAGCATTGCCCATAGTCATAGAAGATCTGGAATGTCCAGGGCACATGCTCATAAAGATGATATGCAATGAGCATGGACTTTTCTTGGAAATTGCTCAGGTGATCCGAAAGCTTGACCTTACCATCTTGAAAGGGACTTTAGAAAACCATCCAAGCACCAGCTGGGCTTGTTTCATCGTTGAGGTTCCAAGAGGTTTTCACAGAATGGATGTTTTATGGCATTTACTGCATCTTCCGCAGCTTAGAAGAAACCTTATCTCGTGTAAAAGCTGA 2088 0.3956 MEATSITQLLKGFCDNTQWEYAFFWKLSHHFPMTLTWENGYQKRNEAVESIWGDINFKSPDDVYSSSGESTDDSGDYSARLLMNEMSHLKYCLGEGVVGKVALAEDHCWVFCEDMLTNKFDTDLIPECPDEWLLQFASGIKTIVLVPVLPQGVLQFGSFEAVAEDMKLVTNIKEKFHSIHCMEANTTPLNMGTDDQDWSFSALTHNLMHCLDESSSIANSVLKGEVSASTALNAKGSTRLNPTMISFIQDECSMSGKNQQKSLKRANENETSSSSIEMSIDPRHIGQMETNANHMEEEIWTMSHSVNNDGVFGEMSNGLGSCFGKNMTQQQFGGIETCHDDTNWKDFFTFPSESELHKALGSVAFEQTGNSMSHTNSSSTLNFNRKGHDYIKGMEFPKEADPENLLDAVISNLCSASDDTSSISNSIRSPMIEFTGFIRPKVNFEESSLIVNARSDIMPAVMVKGRDEVTNRFTSTSFDGNSSLLFDEEWQEKIDSHMQPIRGPKLSSTSKKRARVGNSQNSRPRDRQMIMDRMKELRELVPDGGKGSIDNLLERTIKHMMYLRKITSQAEKLKQFSHCEVSECKKQKINGGHPGRTCAFDFDNELALPIVIEDLECPGHMLIKMICNEHGLFLEIAQVIRKLDLTILKGTLENHPSTSWACFIVEVPRGFHRMDVLWHLLHLPQLRRNLISCKS 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4792g00003 695 MobiDBLite consensus disorder prediction 496 526 - -
Gabi4792g00003 695 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 8 176 IPR025610 -
Gabi4792g00003 695 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 514 563 IPR011598 GO:0046983
Gabi4792g00003 695 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 341 689 IPR043561 GO:0003700|GO:0006355
Gabi4792g00003 695 MobiDBLite consensus disorder prediction 502 525 - -
Gabi4792g00003 695 MobiDBLite consensus disorder prediction 257 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4792g00003 Gabi-Chr4792 100101 104602 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4792g00003 323 689 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 34.097 7.16e-50 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4792g00003 - - gmx:100820605 938.717