Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4792g00001 ATGCCATATTACAACACTGGTTGCTCTTTGATGGAACAACATAAGATTACAACGTTAATATTCACAATTGCAGCATTGTTGCTATTATGCACCGTGACGGCGCGGCAGTGTGGGAACTGCGGCCCGAACCCGGTCCCATACCCGTTGAGCACAGGACCCGACTGTGGAGACCCGTTTTACAAGATCCGGTGCACCGCAGGGACACTGTGGTTGGATGCACTCGCCGGATCATCGTACACAATCAGGTCCATTGACCCGATAACCCGTCGGATCATTATCCGACCCGCAACCCTTGCAGGAAGCGCGTGCGTCTCCACGGACTTCCGCAGCGAAGGCATCCACCTGAACGTGACCCTTCCTTTCAGCTTGGCTGCGAAAAACACCGTCTTGGTGTTCAACTGCACAGCCGCAGCGCCTCACGCGCCAACGATGGACTGCTCGGTGAGCAGCCTGTGCCACAGCTACATCAAGGACCTGCCGTATGCAGGCGGCGCTTGCGGGCGCGTGAGCATGTGCTGCGCGTACAGGACTTGTGGGACTCTCAAGGAGTATGTGGTTAGGGTGCACGCGGGAGGATGCGCGGCGTATCAGAGTTTTGTGGATCTGGACGGTGCGGCGGCGACGGCGGGAAAGAAGTGGCCGGAGCCTGGGGTTGGGATCGAGTGGGTGGCACCACAGGAACCTGTTTGTAAAGGGCCAATAGATTGCAATGTATTTTTGAATTCTAAGTGTGGAGTGGGCCCTCTTGGTGGGGTACAAAGGTGCTTTTGCAATGCTGGATTTAAGTGGGACCCTATCAATGGATTGTGTCAAAAGTGCACAGGACATGGTAAAGGCAGCCCCTGCAAAGTTCGTAAAAAAAAGAAAATGCTTCTGACTGCGGTGGCTATTTCCTTAGGAGGAATAGTCTCTATAGCAACAGTAATTGGAGTCATTCTCTACAAGAAGCATAGTCAAGTGAAGAGAAAAGCAAAGAAGACCATAATGAAAAGGAAGAAGGAAATCTCAAGTGTTAAAGCTAATGCTTTATCATCGAGGATCTTCACGGGCAGAGAGATAAAGAAAGCAACAAACAATTTCTCCCAAGAAAATCTCATTGGCTCTGGTGGTTTTGGTGAAGTGTTCAAGGGAACTTTTGATGATGGAACCATCACTGCCATCAAGCGTGCCAAGCTTGGAAACACAAAAGGCATTGATCAAATACAAAATGAGGTTCGAATACTCTGCCAAGTTAACCATAGAAGCCTAGTGAGACTTCTTGGTTGTTGCTTGGAACTTGAACACCCTTTACTAATATATGAGTATGTTTCTAATGGCACACTTTTTGATTACATACATCGCCACCACCCTTTTGGAACAAGGGCACCTCTCAAATGGCATCAAAGACTCAAAATTGCACACCAAACAGCTGAAGGACTTTCATATCTTCATTCTTCTGCTGTGCCACCCATTTACCACCGTGATGTGAAATCAAGTAATATACTTCTTGATGATAAGTTTGATGCCAAAGTTTCAGACTTTGGCTTATCTAGGCTTGTTGAATTAGCTGAAGAAAATAAGAGCCATATCTTCACTAGTGCTCGGGGAACACTTGGTTATCTTGACCCTGAATACTATCGTAACTTTCAACTCACAGATAAGAGTGATGTTTATAGCTTTGGAGTGGTGTTGATGGAGCTTCTAACTGCTCAGAAAGCTATTGATTTCAATAGGGAAGAAGAGAATGTGAACTTGGCTGTGTATGCTAAGAAGAAATTGATTGATGATAAGTTGATGGATGTTGTTGATCCGTTGCTTAAAGAGGGAGCTAGCAATTTGGAATTGGAAACTATGAAATCATTGGGTTATCTTGCAGCTACATGTATGGATGAGCAGAGACATCAACGGCCTTCAATGAAAGAAGTTTCTGATGAGATTGAATACCTGATTAAAATTGTTAAAGGTCAGGTTTCGAAACAATAA 1962 0.4602 MPYYNTGCSLMEQHKITTLIFTIAALLLLCTVTARQCGNCGPNPVPYPLSTGPDCGDPFYKIRCTAGTLWLDALAGSSYTIRSIDPITRRIIIRPATLAGSACVSTDFRSEGIHLNVTLPFSLAAKNTVLVFNCTAAAPHAPTMDCSVSSLCHSYIKDLPYAGGACGRVSMCCAYRTCGTLKEYVVRVHAGGCAAYQSFVDLDGAAATAGKKWPEPGVGIEWVAPQEPVCKGPIDCNVFLNSKCGVGPLGGVQRCFCNAGFKWDPINGLCQKCTGHGKGSPCKVRKKKKMLLTAVAISLGGIVSIATVIGVILYKKHSQVKRKAKKTIMKRKKEISSVKANALSSRIFTGREIKKATNNFSQENLIGSGGFGEVFKGTFDDGTITAIKRAKLGNTKGIDQIQNEVRILCQVNHRSLVRLLGCCLELEHPLLIYEYVSNGTLFDYIHRHHPFGTRAPLKWHQRLKIAHQTAEGLSYLHSSAVPPIYHRDVKSSNILLDDKFDAKVSDFGLSRLVELAEENKSHIFTSARGTLGYLDPEYYRNFQLTDKSDVYSFGVVLMELLTAQKAIDFNREEENVNLAVYAKKKLIDDKLMDVVDPLLKEGASNLELETMKSLGYLAATCMDEQRHQRPSMKEVSDEIEYLIKIVKGQVSKQ 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4792g00001 653 FunFam Wall-associated receptor kinase-like 20 436 652 - -
Gabi4792g00001 653 Pfam Protein kinase domain 361 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4792g00001 653 CDD STKc_IRAK 366 640 - -
Gabi4792g00001 653 Gene3D Transferase(Phosphotransferase) domain 1 436 651 - -
Gabi4792g00001 653 ProSiteProfiles Protein kinase domain profile. 360 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4792g00001 653 ProSitePatterns Protein kinases ATP-binding region signature. 366 388 IPR017441 GO:0005524
Gabi4792g00001 653 SMART serkin_6 360 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4792g00001 653 FunFam Wall-associated receptor kinase-like 20 322 435 - -
Gabi4792g00001 653 Gene3D Phosphorylase Kinase; domain 1 318 435 - -
Gabi4792g00001 653 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 35 642 IPR045274 GO:0007166
Gabi4792g00001 653 SUPERFAMILY Protein kinase-like (PK-like) 335 637 IPR011009 -
Gabi4792g00001 653 ProSitePatterns Serine/Threonine protein kinases active-site signature. 484 496 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4792g00001 Gabi-Chr4792 15527 18904 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4792g00001 36 652 Receptor kinase-like Gene Family AT5G02070 56.640 0.0 704
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Gabi4792g00001 Pkinase 1.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4792g00001 - - aprc:113862410 1028.47