Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4791g00009 ATGGCTTCTTTCCAAAACTTCAACTTTGAAACTCAAATTCCATCAGAGGTTCTGATAGCTCAGTTCATGCAACTTCATGCAAGCATCTCTAAGCTAGAATCTCTTAGGCCTTCTAAGCAAGTCAATAGCCTTTTCACTCACTTAGTGAAACTCTGCACCCTCCCTTCATCCATTGACATTGAGGCCTTGCCCCAAGAGGTCAAGAACATACGTGAGAGTCTCATTAGCCTATGTGGTCGTGCTGAAGGGCTTTTAGAGCTTGAATTCTCCACTTTCATAAGCCACACACCCAAGCCATTGAACAATCTAACTCTCTTCCCTTACTATGGCAACTATGTCAAACTAGCAAACTTGGAGAACAAAATCTTGAAAGAAAATGGAGTGGTGAATGCAAAGAAGGTAGCATTTGTGGGGTCTGGTCCAATGCCACTCACTTCAATTATAATGGCCATTCATCACATGGAATCTACCCATTTTGATAACTTTGATATTGATGAGAAGGCAAATGAGGCTGCTCGCAAGATTGTTGCTTCAGATGCAGCACTTGAGAAGAGAATGAAGTTTGAGACATATGACATTATGGAACTGAGAGAGAGGTTGGGGCAATATGATTGCATATTTTTGGCAGCACTTGTGGGTATGAGCAGAGAAGAAAAAGTAAAGATTATGGGACACATAAGAAAGTACATGAAGGAGGGTGGTGTTTTGCTTGTGAGAAGTGCTAAAGGTGCTAGAGCTTTCTTGTACCCTATTGTTGAGGAGCATGACTTGCTGGATTTTGAGGTGCTTACCATCTTTCATCCAACAAATGATGTGATCAACTCAGTTGTGCTTCTTCGCAAGCCTAATGTTTAG 855 0.4164 MASFQNFNFETQIPSEVLIAQFMQLHASISKLESLRPSKQVNSLFTHLVKLCTLPSSIDIEALPQEVKNIRESLISLCGRAEGLLELEFSTFISHTPKPLNNLTLFPYYGNYVKLANLENKILKENGVVNAKKVAFVGSGPMPLTSIIMAIHHMESTHFDNFDIDEKANEAARKIVASDAALEKRMKFETYDIMELRERLGQYDCIFLAALVGMSREEKVKIMGHIRKYMKEGGVLLVRSAKGARAFLYPIVEEHDLLDFEVLTIFHPTNDVINSVVLLRKPNV 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4791g00009 284 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 122 240 IPR029063 -
Gabi4791g00009 284 CDD AdoMet_MTases 162 238 - -
Gabi4791g00009 284 Gene3D Vaccinia Virus protein VP39 16 283 IPR029063 -
Gabi4791g00009 284 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 10 284 IPR004298 GO:0030410|GO:0030418
Gabi4791g00009 284 PANTHER NICOTIANAMINE SYNTHASE 3 15 282 IPR004298 GO:0030410|GO:0030418
Gabi4791g00009 284 Pfam Nicotianamine synthase protein 15 282 IPR004298 GO:0030410|GO:0030418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4791g00009 Gabi-Chr4791 76684 77553 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4791g00009 15 281 Nicotianamine Synthase Gene Family AT5G56080 51.292 8.61e-92 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4791g00009 K05953 - gmx:100819726 482.256