Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi478g00007 ATGGGTTCAGTGCCCCCTGAAGCTTCCAGTATGAGAGTGCAAGGTGTCCTTCACCCTGAGGATACTGGTCAAATAGAAAGGTCCAATTGGGTGCTGGATTCTCCCAATCCACCACCTCTCTGGAAGAAGCTACTTAGTTCAGTCAAGGAGACCCTTTTGCCTCATGGGAACAAGTTCTGTTGTTTCTCATCCAAGAAGAAAACTTTCCATGGATATGCTTTCTCATTCTTGCAGGGTTTATTTCCAATCCTTAGTTGGTTAAGAGATTACAATGCCTCAAAGTTTAAAGATGATCTGTTAGCTGGTTTAACTCTTGCCAGCCTGAGCATACCTCAGAGTATAGGATATGCTAATTTAGCAAAAGTGGATCCTGAATATGGACTGTATACTAGTGTTCTTCCTCCTCTTATTTATGCTATGATGGGGAGCTCAAGAGAAATTGCAATTGGACCTGTAGCTGTAGTGTCAATGCTGTTATCCTCCCTGGTTCAGAAAGTGGAAGATCCTGTTGCTAATCCCCATGCTTATAGAAACACCGTCTTTACTGTGACCTTCTTTGCTGGAGTTTTTCAAACTGCATTTGGTGTTTTCAGGTTGGGTTTTCTTGTGGATTTTCTTTCACATGCTGCCCTAGTTGGATTCATGGCAGGCGCAGCCATTATTATTGGTCTTCAGCAGCTCAAGGGATTGCTGGGAATTACTCACTTTACCTCCAAAACTGATGCAGTATCAGTGTTGGCATCTGTTTATAAATCATTACATCATCAAATTACTTCTGGAGAAAAATGGTCCCCTCTGAATTTGATCCTGGGGTGCTCATTCTTGATTTTACTTCTAATTACTCGTTTTATTGGCAGAAGAAACAAAAAGCTTTTCTGGTTGCCTGCTATTTCTCCACTTCTATCAGTTATACTATCAACTTTAATTGTGTATTTGTCAAAAGCTGATACACACGGGGTTAATATAATAAAGCACGTCAAAGGAGGCCTGAATCCAAGTTCAGTTCACCAGTTGCAATTCCATGGTCAAAATGTTGGACAAGCAGCTAAAATTGGACTGATTTGTGCAGTTATTGCACTCACTGAAGCAATAGCTGTTGGTCGATCTTTTGCTTCCATTAAGGGATACCATCTTGATGGGAACAAAGAAATGTTATCAATGGGATTCATGAACATAGCAGGATCTTTAACTTCATGCTATGTGGCAACTGGTTCATTCTCAAGGACTGCAGTAAATTTCAGTGCAGGATGTCAAACAGCAGTATCAAATATTGTGATGGCCATTACGGTGGTTTTGTCCCTCGAATTATTTACAAGGCTCCTATATTACACCCCTATGGCTATCCTTGCTTCTATCATCCTCTCAGCACTTCCTGGATTGATTGACATAAGTGAGGCTTGCTATATCTATAAGGTTGACAAATTAGACTTTCTTGCCTGTGTTGCTGCTTTCTTGGGCGTCTTGTTTGTATCCGTAGAGATTGGTCTTCTTGTTGCAGTGATAATCTCGTTTGCAAAGATACTGATACAATCAATTCGACCTGGAATAGAAGTTCTAGGTAGAGTTCCAAGAACTGAAGCCTTCTGCGATGTTACTCAATATCCCATGGCCATGAGCACTCCAGGCATCATAGTGATTCGCATAAGCTCTGGCTCACTTTGCTTTGCAAATGCTAATTTTGTCAGAGAAAGAATACTGAAGTGGGTCATGGAAGAAGATGACCTTAAAGAAACTACCAAAGGAAGGGTCCAAGCAATAGTTCTAGACATGACAAACCTAATGAATGTTGATACTTCCGGAATTCTAGCACTAGAGGAACTGCACAAGAGGTTGCTTTCACGTGGCGTACAATTAGCTATGGTCAACCCAAGGTGGCTAGTAATTCACAAGCTTAAGCTTGCACACTTTGTTGACAAAATTGGAAAAGAATGGATTTTCCTTACTGTTGGAGAAGCCATAGATGCATGTCTCTCCTAA 1977 0.4107 MGSVPPEASSMRVQGVLHPEDTGQIERSNWVLDSPNPPPLWKKLLSSVKETLLPHGNKFCCFSSKKKTFHGYAFSFLQGLFPILSWLRDYNASKFKDDLLAGLTLASLSIPQSIGYANLAKVDPEYGLYTSVLPPLIYAMMGSSREIAIGPVAVVSMLLSSLVQKVEDPVANPHAYRNTVFTVTFFAGVFQTAFGVFRLGFLVDFLSHAALVGFMAGAAIIIGLQQLKGLLGITHFTSKTDAVSVLASVYKSLHHQITSGEKWSPLNLILGCSFLILLLITRFIGRRNKKLFWLPAISPLLSVILSTLIVYLSKADTHGVNIIKHVKGGLNPSSVHQLQFHGQNVGQAAKIGLICAVIALTEAIAVGRSFASIKGYHLDGNKEMLSMGFMNIAGSLTSCYVATGSFSRTAVNFSAGCQTAVSNIVMAITVVLSLELFTRLLYYTPMAILASIILSALPGLIDISEACYIYKVDKLDFLACVAAFLGVLFVSVEIGLLVAVIISFAKILIQSIRPGIEVLGRVPRTEAFCDVTQYPMAMSTPGIIVIRISSGSLCFANANFVRERILKWVMEEDDLKETTKGRVQAIVLDMTNLMNVDTSGILALEELHKRLLSRGVQLAMVNPRWLVIHKLKLAHFVDKIGKEWIFLTVGEAIDACLS 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi478g00007 658 ProSitePatterns SLC26A transporters signature. 124 145 IPR018045 GO:0008271|GO:0008272
Gabi478g00007 658 FunFam Sulfate transporter 31 513 658 - -
Gabi478g00007 658 Gene3D STAS domain 513 658 IPR036513 -
Gabi478g00007 658 Pfam STAS domain 534 652 IPR002645 -
Gabi478g00007 658 ProSiteProfiles STAS domain profile. 550 656 IPR002645 -
Gabi478g00007 658 NCBIfam sulfate permease 82 652 IPR001902 GO:0016020|GO:0055085
Gabi478g00007 658 PANTHER SULFATE TRANSPORTER 65 656 IPR001902 GO:0016020|GO:0055085
Gabi478g00007 658 SUPERFAMILY SpoIIaa-like 540 656 IPR036513 -
Gabi478g00007 658 Pfam Sulfate permease family 95 482 IPR011547 GO:0016020
Gabi478g00007 658 CDD STAS_SulP_like_sulfate_transporter 534 649 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi478g00007 Gabi-Chr478 155738 159517 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi478g00007 24 657 Inorganic Solute Cotransporters AT5G10180 63.736 0.0 833
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi478g00007 K17469 - gmx:100776591 1095.49