Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4789g00005 ATGGCTTCTTCAGAGAGTTCAACACTGAAACCAATCCCCGGAAGCTATGGCCTTCCATTTTTCGGACCCATGAGTGATAGACACGATTACTTCTACAACCAAGGACGTGACGAGTTCTTCGCCACCCGAGTCCAAAAATACAACTCAACCGTTATCAGAACCAACATGCCACCTGGTCCCTTCATTTCTTCAGACCCTAAAGTCATCGCTCTTCTCGACGGTGTCTCTTTCCCAATCCTCTTCGACAACTCCAAGGTCGATAAGCGCGACGTCCTCGACGGAACCTTCATGCCTTCCACCGCCTTCACCGGCGGTTACCGTACCTGTGCTTTCCAAGACACCACCGAGCCTTCCCACGCGCTCCTTAAGCGTTTCTTTATCCACATACTCTCCTCCAAACACGACACCTTCGTTCCACTCTTCCGTAACACCTTATCGGAGCACTTCGCCGACCTCGAAGAGAAACTCGCCGGAAAATCCTGCAGCTTCAACTCCTCCAACGGCACCGCCACCTTCAACTTCCTCTTCCGCCTCCTCACCGACAAGGATCCGGCCGAAACCAAGATCGGCTCCGACGGCCCCAAGCTCGTCGAGACCTGGCTCGCCGCTCAGCTCGCTCCGCTCGCCACCGCCGGCTTGCCGAAGATATTCAACTACTTGGAAGATTTCGCGATCAGAACGGTCCCGTTCCCGTCGTGGACCGTTAAGTCAGGCTACAAGAAGCTCTGTGAAGGTTTCTCGGCGGCGGGTGCGGCGGTGCTCGACGAAGCAGAAAAAATGGGGATCAAGAGGGACGAAGCTTGCCATAACCTGGTTTTCATGTTAGGGTTCAACGCTTACGGTGGGTTGACCAACCAGTTCGCTATTCTGATCAAATGGCTCGGGTTGGGTGGTGAGGGTTTACACAAGCAACTCGCTGATGAAATCAGGACCGTTGTTAGGGACGAAGGTGGAGTCACTATCGGAGCGTTGGATAAGATGACTTTGACCAAATCAGTGGTGTACGAAGCGCTTAGGATAGAGCCTGCTGTACCCTATCAGTACGCCAAGGCGAGGGAGGATCTGGTGGTGCATAGTCACGATGCGGCTTATGAGATCAAGAAAGGTGAGATGATCTTTGGATATCAACCGTTCGCTACAAAGGATCCGAAGATTTTCGAGAATCCCGAAGAGTTTGTGGGCCATAGGTTTGTGGGTGATGGAGAAAAGCTGTTGAAACACGTGTTCTGGTCCAATGGACGCGAGACGGAGGAGCCCACACCCGATAATAAACAATGTCCCGCCAAGAATCTGGTGGTGCTCTTGTGCAGGTTGTTCTTGGTGGAATTCTTCTTGCGCTACGACACGTTTACGTTCGAGTTTAAACCAGTTGTTCTGGGTCCCAACGTTACCATCAAGTCTTTCACTAAGGTCTAA 1416 0.5219 MASSESSTLKPIPGSYGLPFFGPMSDRHDYFYNQGRDEFFATRVQKYNSTVIRTNMPPGPFISSDPKVIALLDGVSFPILFDNSKVDKRDVLDGTFMPSTAFTGGYRTCAFQDTTEPSHALLKRFFIHILSSKHDTFVPLFRNTLSEHFADLEEKLAGKSCSFNSSNGTATFNFLFRLLTDKDPAETKIGSDGPKLVETWLAAQLAPLATAGLPKIFNYLEDFAIRTVPFPSWTVKSGYKKLCEGFSAAGAAVLDEAEKMGIKRDEACHNLVFMLGFNAYGGLTNQFAILIKWLGLGGEGLHKQLADEIRTVVRDEGGVTIGALDKMTLTKSVVYEALRIEPAVPYQYAKAREDLVVHSHDAAYEIKKGEMIFGYQPFATKDPKIFENPEEFVGHRFVGDGEKLLKHVFWSNGRETEEPTPDNKQCPAKNLVVLLCRLFLVEFFLRYDTFTFEFKPVVLGPNVTIKSFTKV 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4789g00005 471 FunFam Allene oxide synthase, chloroplastic 7 471 - -
Gabi4789g00005 471 PANTHER CYTOCHROME P450 26 11 450 - -
Gabi4789g00005 471 Gene3D Cytochrome P450 3 471 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4789g00005 471 PRINTS E-class P450 group IV signature 327 343 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4789g00005 471 PRINTS E-class P450 group IV signature 426 444 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4789g00005 471 PRINTS E-class P450 group IV signature 364 378 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4789g00005 471 PRINTS E-class P450 group IV signature 380 398 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4789g00005 471 Pfam Cytochrome P450 303 400 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4789g00005 471 CDD CYP74 42 466 - -
Gabi4789g00005 471 SUPERFAMILY Cytochrome P450 8 451 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4789g00005 Gabi-Chr4789 46941 48535 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4789g00005 4 470 Cytochrome P450 AT5G42650 50.531 2.91e-162 467
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4789g00005 K01723 - gmx:100810890 811.216