Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4787g00002 ATGGATTATTTACCTCAAAATTCCCTAAACTCTTTTGCAATTGGAATCCTTTCTATAATCTTTCTTTGCTTATTCCTATTCCATCGCTCAAAATCAACCCATGGTAGAGAACCACCCTTGGTTGAAGGTGCATGGCCAATACTTGGTCACCTTCCATTGTTAACAGGTTCCAAACCAACCCATCACACCCTTGGTGCCATGGCTGACAAATATGGACCCATTTTCACCATAAAGCTTGGTGCTTCCCGTGCTTTGGTTATAAGCAACTATGAAATGGCCAAGGAATGTTTCACCACAAATGACTTGGCTGTTTCATATCGCCCTAACCTTGTAGCTTGTGAACACATGACATATAACAAAGCCATGCTTGGTTTTGCACCCTATGGTTCTTATTGGCGTGAGATGAGAAAGATTGTCACTTTAGGATTCCTTTCAAATCACAGAATTGATCTACTAAGCCATGTTCGTGTCTCTGAATTGCAGACTTCAATTAAAGAGCTTTTCAATGCTTGGTCACGTGGAAAGGACAATAACAACAACAACTTTCTGTTGTTGGTGGAGTTGAAGCAGTGGTTTCATGAGTTGGCATTTAACACTGCTCTTAGAATGGTTGCTGGGAAGAGATATTTTGGGGAAAGTGCAGTGGTTGATGAGATTGAAGCACAGAGGTGTTTGAAATCTTTGAGGGAGTTCATGCGTCTTGTTGGGGTGTTTACTGTTGCAGATGCTATTCCTTATCTTAGATGGTTTGATTTTGGAGGACATGAGAAGGCTATGAAAGAAAATGCTAAGGAATTGGATAGTGTGGTAACAGAGTGGCTTGAAGAGCATCGTCTGAAGAGGGGTTCTGGTGAGAAGGTTACGAGGGATGAAGATTTCATGGATGTGATGCTTTCGATGATTGATGGGACAACGATTCATGGGTTTGATGCAGATACCATCATCAAAGCCACAACACTGGCATTGGTTTTGGGAGCAACTGACACCAGCAGTGTTACCCATGTATGGGCAATGTGTTTGCTATTGAACAATCCTCATACATTGCAAAAAGTAAAAGAAGAAATTGATGTCCACATTGGAAAAGAGAGATTGGTGACTGAGTCAGATATTAACAAGCTGGTTTACCTTCAAGCAGTTGTTAAAGAGGCCCTAAGGTTGTATCCAGCATCTCCACTTTCTGGAGCTCGTGAATTCAGAGAAGATTGCATGTTTGGTGACTACCATGTGAAGAAGGGAACTAGACTAATAACAAACTTGTGGAAGATCCAAACAGACCCTAACATTTGGTCAGAACCATTGGAGTTCAAGCCAGAGAGGTTCCTCACTACACACAAAGATGTTGATGTTAAGGGTCAACATTTTGAGTTCTTACCCTTTGGAAGTGGTAGAAGGATATGTCCTGGAATATCCTTTGGCCTTAGAACAGCTCATTTGACTTTGGCAAGCTTTCTTCACTCCTTTGAAATCTCAAAAACATCAAGTGAACCTATTGATATGAGTGCTGTGGTAGAAACAACCAACATCAAAGTTGTTCCCCTTGAAGTTCTCATCAAACCCCGTTTGTCTCCCAATATTTATGAAACCGTGGGACCGTGGTGTTAA 1602 0.4145 MDYLPQNSLNSFAIGILSIIFLCLFLFHRSKSTHGREPPLVEGAWPILGHLPLLTGSKPTHHTLGAMADKYGPIFTIKLGASRALVISNYEMAKECFTTNDLAVSYRPNLVACEHMTYNKAMLGFAPYGSYWREMRKIVTLGFLSNHRIDLLSHVRVSELQTSIKELFNAWSRGKDNNNNNFLLLVELKQWFHELAFNTALRMVAGKRYFGESAVVDEIEAQRCLKSLREFMRLVGVFTVADAIPYLRWFDFGGHEKAMKENAKELDSVVTEWLEEHRLKRGSGEKVTRDEDFMDVMLSMIDGTTIHGFDADTIIKATTLALVLGATDTSSVTHVWAMCLLLNNPHTLQKVKEEIDVHIGKERLVTESDINKLVYLQAVVKEALRLYPASPLSGAREFREDCMFGDYHVKKGTRLITNLWKIQTDPNIWSEPLEFKPERFLTTHKDVDVKGQHFEFLPFGSGRRICPGISFGLRTAHLTLASFLHSFEISKTSSEPIDMSAVVETTNIKVVPLEVLIKPRLSPNIYETVGPWC 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4787g00002 533 Gene3D Cytochrome P450 32 524 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4787g00002 533 Pfam Cytochrome P450 42 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4787g00002 533 FunFam Cytochrome P450 82C4 28 518 - -
Gabi4787g00002 533 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4787g00002 533 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4787g00002 533 PRINTS E-class P450 group I signature 314 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4787g00002 533 PRINTS E-class P450 group I signature 377 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4787g00002 533 PRINTS E-class P450 group I signature 418 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4787g00002 533 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4787g00002 533 PRINTS E-class P450 group I signature 195 213 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4787g00002 533 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4787g00002 533 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4787g00002 533 SUPERFAMILY Cytochrome P450 44 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4787g00002 533 PANTHER CYTOCHROME P450 82C3-RELATED 18 526 - -
Gabi4787g00002 533 CDD CYP82 72 520 - -
Gabi4787g00002 533 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
Gabi4787g00002 533 PRINTS P450 superfamily signature 325 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4787g00002 533 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4787g00002 533 PRINTS P450 superfamily signature 378 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4787g00002 Gabi-Chr4787 36702 39009 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4787g00002 8 526 Cytochrome P450 AT4G31940 48.479 1.17e-180 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4787g00002 - - gmx:100802193 775.393