Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4785g00011 ATGGAAGCAAGAGAAGGTATTAGTTCTGGGGTTACAGTGATAGGGGCAGAAGCTCCATCAACCTATCATGTTGCACCAAGAAGTGAAGCTCCAAGCCAGGGTGCTGTTCCTGAAGCAGCAGCTGCGGCGATTGGTGTCTCACCAGTGAGTGCAGGATTGGATGGAACAGCAGTTAAGAAGAAACGAGGTAGACCAAGGAAATATGGGCAAGATGGGTCAGTCTCTATGGCATTGTCACCATTGCCAGTCTCATCTTCAGCTCCACTTTCTAATGAATTTTCAAGCGGAAAGCGGGGTAGACCACAGGGGATGGAGTACAAGCAGCCAAAAAAAGTTGGAGTGGATGATCTAGGTGACTCTGTTGGTACAAACTTTATGCCCCATATCATTAATGTCAATGCTGGCGAGGACATTACAATGAAGGTTATATCTTTTTCCCAGCAAGGACCCCGGGCTATATGTATCCTATCTGCTAATGGTGTAATTTCAAATGTTACACTTCGTCAGCCTGATTCTTTAGGGGGGACTTTGACCTATGAGGGCCGTTTTGAGATACTTTCATTGTCTGGATCATTCATGCCTACTGACAGACAAGGAACAAGGAGCAGGTCTGGTGGTATGAGTGTTACTTTGTCAAGCCCAGATGGTCGTGTTGTCGGTGGTGGAGTTGCTGGTCTTCTTGTTGCTGCCAGTCCTGTCCAGGTGGTGGTGGGAAGTTTTTTGCCAAGCAACCAACAAGATCAAAAACCAAAGAAGCCCAAGTCTGATTATGCAACAACAACAACTGTTACCCCAGCCATTGCAGTATCTTCTGCACCAACCCCAACTAATGGTGAAAAAGAGGATGTCATGGGTGGACATCTAATGCAAAATGCTGGAACTCTTAACTCAAACCTTACTCCTCCATCCACCTTTAGAAGAGAAAACTGGGTTAACATGCACTCTATGCCTGACCCCATGAAGTCTGCTACTGATATTAACATATCTTTGCCTGATAGTTAA 1002 0.4571 MEAREGISSGVTVIGAEAPSTYHVAPRSEAPSQGAVPEAAAAAIGVSPVSAGLDGTAVKKKRGRPRKYGQDGSVSMALSPLPVSSSAPLSNEFSSGKRGRPQGMEYKQPKKVGVDDLGDSVGTNFMPHIINVNAGEDITMKVISFSQQGPRAICILSANGVISNVTLRQPDSLGGTLTYEGRFEILSLSGSFMPTDRQGTRSRSGGMSVTLSSPDGRVVGGGVAGLLVAASPVQVVVGSFLPSNQQDQKPKKPKSDYATTTTVTPAIAVSSAPTPTNGEKEDVMGGHLMQNAGTLNSNLTPPSTFRRENWVNMHSMPDPMKSATDINISLPDS 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4785g00011 333 MobiDBLite consensus disorder prediction 55 113 - -
Gabi4785g00011 333 Gene3D - 127 259 - -
Gabi4785g00011 333 MobiDBLite consensus disorder prediction 194 213 - -
Gabi4785g00011 333 FunFam AT-hook motif nuclear-localized protein 1-like 127 258 - -
Gabi4785g00011 333 MobiDBLite consensus disorder prediction 77 97 - -
Gabi4785g00011 333 ProSiteProfiles PPC domain profile profile. 122 263 IPR005175 -
Gabi4785g00011 333 Pfam Plants and Prokaryotes Conserved (PCC) domain 127 240 IPR005175 -
Gabi4785g00011 333 MobiDBLite consensus disorder prediction 194 211 - -
Gabi4785g00011 333 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 29 301 IPR039605 GO:0003680
Gabi4785g00011 333 SUPERFAMILY AF0104/ALDC/Ptd012-like 125 244 - -
Gabi4785g00011 333 CDD DUF296 127 217 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4785g00011 Gabi-Chr4785 94324 102178 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4785g00011 10 272 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 55.184 2.98e-94 282
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4785g00011 - - gmx:100777213 497.664