Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4785g00004 ATGGAAGAGGGAAAAGGAAGAGTTTGTGTAACTGGAGGTACAGGGTTTATTGGTTCATGGATCATCAAGAGACTCCTTGAAGATGGTTACACTGTTAATACCACTGTTAGATCTGATCCAGAACACAAGAAAGATGTTAGCTACCTCACAAATCTTCCAGGTGCATCCCAAAAGCTACAATTTTTCAACGCTGATCTTAGCAACCAAGAAAGTTTCAGTGCAGCAATTGAAGGGTGCATTGGGATATTCCACACTGCTACTCCGATGGATTTTGAAGAAAATGAACCTGAGGAAATAGTGACCAAAAGAACCATTGATGGGGCATTAGGCATTCTAAAAGCATGCCTAAATTCAAAGACAGTGAAAAGAGTTGTTTACACTTCTAGTGCCTCTGCTGTTTGCTGGCAGCACAAAGAAGAAGAAGTGATGGATGAGAGTTATTGGAGTGATGTGAATATTCTTAGAGCTTTGAAGCCATTTACTTGGTCATATGCAGTTTCTAAGACATTGGCTGAGAAAGCTGTTCTTGAATTTGGAGAACAACATGGGTTGGATGTTGTGACTCTAATACCTACTTTTGTTCTTGGACCCTTCATTTGTCCTAAGCTCCCTGGCTCTGTTTATTCCTCACTGTTTTTGTTGTTTGGTGACAAGAATCCATTGACAGCATCTCGTACCCATGTGGTGCATGTTGATGATGTAGCTAGAGCACATATATTCTTGCTTGAACATCCTAATCCAAAAGGGAGATATAATTGCTCACAAGGCGTTGTAACTGTTGAAGAAATAGCTGAAATTCTTTCTACTAAATACCCAGAATTTCAAATACCATCACTAGAGGAGGTGAAAAAAATTAAAGGTCCCAAGCTTCCACATTTAACGTCGAAAAAACTCAAGGATGCTGGATTCGAGTTCAAGTATGGCCTTGAGGAAATGTTTGATGATGGAATTCAATGCTGCAAGGAAAAGGGTTTTTTGTAA 981 0.3965 MEEGKGRVCVTGGTGFIGSWIIKRLLEDGYTVNTTVRSDPEHKKDVSYLTNLPGASQKLQFFNADLSNQESFSAAIEGCIGIFHTATPMDFEENEPEEIVTKRTIDGALGILKACLNSKTVKRVVYTSSASAVCWQHKEEEVMDESYWSDVNILRALKPFTWSYAVSKTLAEKAVLEFGEQHGLDVVTLIPTFVLGPFICPKLPGSVYSSLFLLFGDKNPLTASRTHVVHVDDVARAHIFLLEHPNPKGRYNCSQGVVTVEEIAEILSTKYPEFQIPSLEEVKKIKGPKLPHLTSKKLKDAGFEFKYGLEEMFDDGIQCCKEKGFL 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4785g00004 326 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 320 IPR036291 -
Gabi4785g00004 326 CDD FR_SDR_e 8 303 - -
Gabi4785g00004 326 Pfam NAD dependent epimerase/dehydratase family 8 252 IPR001509 -
Gabi4785g00004 326 Gene3D - 5 326 - -
Gabi4785g00004 326 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 6 315 - -
Gabi4785g00004 326 FunFam Dihydroflavonol 4-reductase family 6 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4785g00004 Gabi-Chr4785 55018 57157 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4785g00004 4 326 Monolignol Biosynthesis Gene Families AT2G02400 38.095 4.86e-64 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4785g00004 - K13265 gmx:102659875 553.518