Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4779g00013 ATGGCAAGCATCCCTAGCATTCCATCTCATATAAAAGCATGGGTCTACTCTGAATATGGGGAAATAGAAGAAATTCTCAAGCTTGATCATAATGTAACTACACCACACCTTAAGGAAGACCAGGTACTAATCAAGGTTGTGGCTGCATCCCTTAATCCTGTTGATTTTATGACGGCTCTTGGGGATTTTAAGGACACTGCCTCTATTTTACCCACTGCACCAGGGTACGATGTTGCTGGTGTGGTGGTAAGAGTGGGAAGTCAAGTGAAGAAATTTAAAGTTGGTGATGAAGTTTATGGTGATGTTAATGAGATTACATACCATCAAAAGATCATTGGTTCTTTGGCAGAGTATACTGCTGCTGAAGAAAAAGTATTGGCTCATAAACCCTCCAATTTGAGCTTTGTTGAAGCTGCTAGCCTCCCTTTAGCAATCATTACTGCTTATCAAGGACTTGAAAGAGTTGGGTTTTCTGCTGGCAAATCTATACTTATTCTTGGAGGTGCTGGTGGAGTTGGAACCCTTCTTATTCAGGTAGCCAAGCATGTTTTTGGAGCATCCAAGGTTGCTGCTACTGCTAGTACTGCAAAACTTGAATTGTTGAGGAGCTTGGGAGCAGACTTGGCTATTGATTATACAAAGGAGAATTTTGAAGAATTGCCAGAAAAATTTGATGTAGTGTACGATGCAGTAGGGCAGAGTGAGAGGGCATTGAAGGGTGTTAAAGAAGGTGGCAAAGTTGTGACAATAGCTGAAAAGGGAAGTCCAGCTTTCTTTGTCCTCACTTCAGATGCGACTGTGTTGGAGAAACTACAACCTTATTTGGAGAGTGGCAAGGTGAAGCCAATTCTTGATACCAAGAGCCCCTTTCCATTTTCTCAGACTGTGGAAGCATTTTCCTACCTCAAGACTAATAAAGCAATAGGCAAAGTTGTCATAAGTCCCATCCCATGCCATGACCATAATTATTTAATCATATCAATTTCTCTGGCCTTCATTTATGCTGTTTTGTTTTGTCTATCTGAGACACAAATTGTAATAAATCTCTTAAGAGATGTGGTTGTTACTTTTTATAATTACCCATGTTGTTTGTGTTCTGGCTACACAATAGGCCATTATGGTACGTTGTTCAACATCTTATAA 1143 0.4024 MASIPSIPSHIKAWVYSEYGEIEEILKLDHNVTTPHLKEDQVLIKVVAASLNPVDFMTALGDFKDTASILPTAPGYDVAGVVVRVGSQVKKFKVGDEVYGDVNEITYHQKIIGSLAEYTAAEEKVLAHKPSNLSFVEAASLPLAIITAYQGLERVGFSAGKSILILGGAGGVGTLLIQVAKHVFGASKVAATASTAKLELLRSLGADLAIDYTKENFEELPEKFDVVYDAVGQSERALKGVKEGGKVVTIAEKGSPAFFVLTSDATVLEKLQPYLESGKVKPILDTKSPFPFSQTVEAFSYLKTNKAIGKVVISPIPCHDHNYLIISISLAFIYAVLFCLSETQIVINLLRDVVVTFYNYPCCLCSGYTIGHYGTLFNIL 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4779g00013 380 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 3 317 IPR044626 GO:0016628
Gabi4779g00013 380 CDD MDR_like_2 12 313 - -
Gabi4779g00013 380 SMART PKS_ER_names_mod 20 313 IPR020843 GO:0016491
Gabi4779g00013 380 Gene3D - 18 313 - -
Gabi4779g00013 380 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 133 259 IPR036291 -
Gabi4779g00013 380 Gene3D - 152 264 - -
Gabi4779g00013 380 SUPERFAMILY GroES-like 8 165 IPR011032 -
Gabi4779g00013 380 Pfam Zinc-binding dehydrogenase 204 313 - -
Gabi4779g00013 380 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 160 181 IPR002364 GO:0008270|GO:0016491
Gabi4779g00013 380 Pfam Alcohol dehydrogenase GroES-like domain 40 101 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4779g00013 Gabi-Chr4779 49862 51618 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4779g00013 39 207 Monolignol Biosynthesis Gene Families AT4G39330 25.510 8.18e-06 45.4