Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4779g00012 ATGGGATCTCACATAAAAGCTTGGGTCTACACTGAGTATGGGAACATAGAAGAGATTCTCAAATTTGATCCTAATGTAGCTATACCAGATATCAAGGAAGACCAAGTGCTAATAAAGGTTGTGGCTGCTGCCCTTAATCCTGTAGATAATTTGAGGGCTCTTGGATATTTTAAGGACACTGACTCTCCTTTACCCACTATTCCGGGGTATGATGTTGCTGGTGTGGTGGTAAGAGTGGGAAGTAAAGTGAGGAAATTTAAAATTGGTGATGAAGTTTATGGTGATATCAATGAACTTTCTGTGAACTATCCAAAAACCATTGGTTCTTTGGCAGAATATACTGCTGCTGAAGAGAAAGTATTGGCTCATAAACCCTCCAATTTGAGCTTTATTGAAGCTGCTAGCCTTCCTGCAGTGATCCTTACTGCTTATCTAGGACTCGAAAAAGTTGAGTTTTCTGCTGGCAAATCTATACTTGTTCTTGGAGGTTCTGGAGGAGTTGGAACCCTTGTTATTCAGCTGGCCAAACATGTTTTTGGAGCATCTAAGGTTGCAGCTACTGCTAGTACTCCAAAACTTGAATTGTTGAGGAACTTGGGAGCAGACTTCCCTATTGATTATACAAAGGAGAATTTTGAAGAATTGCCTGAAAAGTTTGATGTAGTGTACGATGCAGTAGGACAGAGTGACAAGGCACTGAAGGCTATTAAAGAAGGGGGCAAAGTTGTGACCATAGTACCACCAGCAACTCCACCAGCTATTGACTTTTTTCTCGTTTCAGATGGGGCTGTGTTGGAGAAACTACAACCTTACTTAGAGAGTGGAAAGGTGAAGCCAGTGTTGGACCCCAAGAGCCCTTTTCCATTTTCTCAGACTGTGGAAGCATATGCATACCTTAAGACTAATAGAGCCATTGGGAAAGTAGTCATACATCCCATCCCATAA 945 0.4169 MGSHIKAWVYTEYGNIEEILKFDPNVAIPDIKEDQVLIKVVAAALNPVDNLRALGYFKDTDSPLPTIPGYDVAGVVVRVGSKVRKFKIGDEVYGDINELSVNYPKTIGSLAEYTAAEEKVLAHKPSNLSFIEAASLPAVILTAYLGLEKVEFSAGKSILVLGGSGGVGTLVIQLAKHVFGASKVAATASTPKLELLRNLGADFPIDYTKENFEELPEKFDVVYDAVGQSDKALKAIKEGGKVVTIVPPATPPAIDFFLVSDGAVLEKLQPYLESGKVKPVLDPKSPFPFSQTVEAYAYLKTNRAIGKVVIHPIP 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4779g00012 314 Pfam Alcohol dehydrogenase GroES-like domain 34 95 IPR013154 -
Gabi4779g00012 314 SMART PKS_ER_names_mod 14 310 IPR020843 GO:0016491
Gabi4779g00012 314 CDD MDR_like_2 6 310 - -
Gabi4779g00012 314 Pfam Zinc-binding dehydrogenase 199 310 - -
Gabi4779g00012 314 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 128 254 IPR036291 -
Gabi4779g00012 314 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 3 314 IPR044626 GO:0016628
Gabi4779g00012 314 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 155 176 IPR002364 GO:0008270|GO:0016491
Gabi4779g00012 314 Gene3D - 147 261 - -
Gabi4779g00012 314 SUPERFAMILY GroES-like 3 160 IPR011032 -
Gabi4779g00012 314 Gene3D - 12 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4779g00012 Gabi-Chr4779 44433 47825 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4779g00012 33 257 Monolignol Biosynthesis Gene Families AT4G37980 25.490 2.12e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4779g00012 K18980 - gmx:100791274 530.791