Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4779g00002 ATGGGTGGTTGCTTTAGCAATAGGAGGATTAAGGGTGTGAGCCCTTCTTCCATTACAGGGTTCACTTCTAGTTCTAGAAGTGTACGTGTAAACGTAAGCAGGAGGAGTGGCCATGACATCAGCTCCTCAAATAATAGCAGCAGTAATTCATCATCAGCCTCCATATCTGTCACTACTACTTCTAGAAGTGACGATGAGATCTTGCAGCAATCTTCCAATTTGAAAAGCTTCAGCTACAGTGAACTAAGAGCAGCCACAAGAAATTTCCGCCGAGATAGTGTCTTAGGGCAGGGTGGATTTGGTTCTGTTTTTAAGGGCTGGATTGATGAGCATTCACTTGCTCCTACCAAACCAGGAATCGGCATGATTGTTGCTGTAAAGAGGCTTAACCAAGAGGGCTTCCAGGGTCACAAAGAATGGTTGGCTGAAATCAACTATCTTGGGCATCTGCAGCATCCTAATCTTGTCAAGTTAATAGGATACTGCTTCGAGGATCAGCATCGGCTTCTGGTTTATGAATTTATGCCTAAGGGCAGCATGGACAATCATCTCTTCAGAAGAGGTTCTTATTATCAGTCATTCTCTTGGAGTTTACGATTGGAAATAGCCCTTGAGGCTGCAAGGTGTCTCGCTTTTCTCCATAGTACAGAACCTAAAGTCATATACCGTGACTTTAAAACTTCAAATATCCTACTTGATGCTAACTATAAGCCCAAACTCTCTGATTTTGGTTTGGCCAGAGATGGGCCAACTGGTGATAAAACCCATGTCTCTACTAGGGTCATCGGAACCCGTGGATATGTGGCACCGGAGTATCTTGCAACAGGTCATCTCACTGCAAAGAGTGATGTATATAGTTTTGGAGTAGTTCTTCTCGAAATAATATCAGGAAGACGAGCTATAGACAATAACAAACCACCTGGAGAACATAACCTAGTTGAATGGGCCAAACCTTACCTATCCAACAAACGCCGAGTTTTTCGAGTAATGGATCCGCGTCTTGAGGGACAATATTCCCATACTCGAGCTCAAGCAGCAGCCACACTTGCTTTGCAATGTCTTGCTGTAGTACCTAAAAGCAGGCCAAATATGGATGAAGTGGTAAGAGCATTAGAGCTGCTTCAGGAATCAAAGGACATGCAGAAAAAAAATTGTCTTCAGAAAGAGCATCGCGAACGCAGTTCTGCACTCGGCCATCCCAACGGCCGCCCTATAGCTGACAAAGGTAGTGCAGATGCTCCCAGAAAGGCTTCTGCTTATCCTAGGCCTGAGTTTTGTGATGTGGCCAGTTGTTGTAGGAAGAACGTAAAAAGTTCAGAGATATAG 1326 0.4427 MGGCFSNRRIKGVSPSSITGFTSSSRSVRVNVSRRSGHDISSSNNSSSNSSSASISVTTTSRSDDEILQQSSNLKSFSYSELRAATRNFRRDSVLGQGGFGSVFKGWIDEHSLAPTKPGIGMIVAVKRLNQEGFQGHKEWLAEINYLGHLQHPNLVKLIGYCFEDQHRLLVYEFMPKGSMDNHLFRRGSYYQSFSWSLRLEIALEAARCLAFLHSTEPKVIYRDFKTSNILLDANYKPKLSDFGLARDGPTGDKTHVSTRVIGTRGYVAPEYLATGHLTAKSDVYSFGVVLLEIISGRRAIDNNKPPGEHNLVEWAKPYLSNKRRVFRVMDPRLEGQYSHTRAQAAATLALQCLAVVPKSRPNMDEVVRALELLQESKDMQKKNCLQKEHRERSSALGHPNGRPIADKGSADAPRKASAYPRPEFCDVASCCRKNVKSSEI 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4779g00002 441 MobiDBLite consensus disorder prediction 16 66 - -
Gabi4779g00002 441 Gene3D Phosphorylase Kinase; domain 1 63 174 - -
Gabi4779g00002 441 ProSitePatterns Protein kinases ATP-binding region signature. 95 127 IPR017441 GO:0005524
Gabi4779g00002 441 FunFam Serine/threonine-protein kinase BIK1 56 174 - -
Gabi4779g00002 441 PANTHER OS01G0588500 PROTEIN-RELATED 49 375 - -
Gabi4779g00002 441 Pfam Protein kinase domain 90 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4779g00002 441 SUPERFAMILY Protein kinase-like (PK-like) 60 373 IPR011009 -
Gabi4779g00002 441 ProSiteProfiles Protein kinase domain profile. 89 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4779g00002 441 MobiDBLite consensus disorder prediction 381 420 - -
Gabi4779g00002 441 MobiDBLite consensus disorder prediction 381 397 - -
Gabi4779g00002 441 Gene3D Transferase(Phosphotransferase) domain 1 175 397 - -
Gabi4779g00002 441 FunFam Serine/threonine-protein kinase PBS1 175 390 - -
Gabi4779g00002 441 ProSitePatterns Serine/Threonine protein kinases active-site signature. 220 232 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4779g00002 Gabi-Chr4779 3646 9593 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4779g00002 31 379 Glycoside Hydrolase AT3G07070 44.857 2.83e-101 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gabi4779g00002 Pkinase 8.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4779g00002 - - gmx:100819620 605.905