Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4778g00008 ATGGCTATAGCGAATAATGGTGGTGTGTTCTCACTCTCACTCTCAGGACTAAGGGGAAGAAGGCCAGAGCATTCGGTGCCTTCTCTTCCTTTCAGTTGCAGTGCCTCTGAAAACATTCCCATCAAATTCTCAACCACCCATTTCCATTTCGGTTATTCATTTCACAAGCTTCAGCTTCGGTCGTTTAACACCAAAAGAAAAATGTGCGGGGTGCCAGTGTCAATGGCTATGGCAACGGGGGCGCATGAAGTTCTTCCACCGCCCCTTACTTCTACTTCAGCCCCACCTTCCTTGTTTGATGGAACTACAAGGTTGTATATCTCCTACAAATGCCCGTATGCCCAGCGTGTATGGATCACCCGTAACTGTAAGGGATTGCAGGACCAGATACAATTGGTTCCTATTGATCTACAAGATAGGCCTTCTTGGTATAAGGACAAAGTCTACCCACCCAACAAGGTTCCATCTTTGGAACACAATGATGAAGTTAGAGGAGAGAGTCTTGATCTGATTAAATATATTGACAGTCACTTTGAAGGGCCCTCCCTTTTTCCTAGTGGTCCTGCTAAGGAGTTTGCTGAAGAATTGATATCTTACACTGATACCTTTTACAAGACCGTTGTTTCCTCATTTAAAGGAGATGTGACTGAAGCCGGCACTGCATTCGATTACATCGAAACTGCTCTCTCCAAATATGATCATGGTCCTTTCTTCCTTGGCCAATTCAGTCTAGTGGATATAGCATATGTTCCTTTCATTGAAAGATTTCAACCATTTCTAATGGATGTGAAAAATTATGATATTAAAATGGGCAGGCCTAAACTGGCAGTATGGATTGAGGAAATGAACAGCATCGATGGCTACAAAATAACCCGATCTGATCCCCAGGAGCTTGTTGAAAGCTACAAGAAACGCTTCCTGGCCAATCCCTAA 933 0.4373 MAIANNGGVFSLSLSGLRGRRPEHSVPSLPFSCSASENIPIKFSTTHFHFGYSFHKLQLRSFNTKRKMCGVPVSMAMATGAHEVLPPPLTSTSAPPSLFDGTTRLYISYKCPYAQRVWITRNCKGLQDQIQLVPIDLQDRPSWYKDKVYPPNKVPSLEHNDEVRGESLDLIKYIDSHFEGPSLFPSGPAKEFAEELISYTDTFYKTVVSSFKGDVTEAGTAFDYIETALSKYDHGPFFLGQFSLVDIAYVPFIERFQPFLMDVKNYDIKMGRPKLAVWIEEMNSIDGYKITRSDPQELVESYKKRFLANP 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4778g00008 310 Gene3D Glutaredoxin 76 179 - -
Gabi4778g00008 310 FunFam Lambda class glutathione S-transferase 180 309 - -
Gabi4778g00008 310 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 101 182 IPR004045 -
Gabi4778g00008 310 SUPERFAMILY Thioredoxin-like 94 183 IPR036249 -
Gabi4778g00008 310 FunFam Glutathione S-transferase L2, chloroplastic 76 179 - -
Gabi4778g00008 310 PANTHER GLUTATHIONE S-TRANSFERASE L1 81 306 IPR044629 GO:0004364
Gabi4778g00008 310 Pfam Glutathione S-transferase, C-terminal domain 215 280 - -
Gabi4778g00008 310 Gene3D - 180 309 - -
Gabi4778g00008 310 SUPERFAMILY GST C-terminal domain-like 178 306 IPR036282 -
Gabi4778g00008 310 CDD GST_C_Lambda 187 303 - -
Gabi4778g00008 310 Pfam Glutathione S-transferase, N-terminal domain 105 181 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4778g00008 Gabi-Chr4778 75076 77872 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4778g00008 87 308 Glutathione S-transferase Gene Family AT3G55040 65.625 6.86e-106 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4778g00008 K00799 - twl:119981489 371.318