Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4778g00007 ATGGCATCAGCTACAATTAGGCGCATTGTATCACCCTGTTGGAGATCATCCATTGCGGGTGAAAAGTCTAATAGGAATGGGGATTCAAGTGGTCGTGTTAATGGTTTGCTGTGGTATAAAGATTCGGGAAGACACGTGAATGGTGAATTCTCAATGGCAGTTGTTCAAGCAAACTATTTGTTGGAGGATCAAAGCCAAATTGAATCAGGTTCCATGAGCTCAATTGCAGCAAGTCCTCAAGGAACTTTTGTTGGAATATATGATGGGCATGGAGGTCCAGAAGCTTCCCGCTTTGTCAATGACAGCCTATTTAAGAATATCAAGAAATTTACTGCAGAAAATCAGGAAATGTCAGCTGATGTTATCCATAAAGCATTCTTGGAAACAGAAGAAGAATTTCTTTCTTTTGTAAGGAAGCAGTGGCAACACAAGCCACAAATAGCATCGGTTGGATCTTGCTGCTTGGTAGGCATAATATGTAGCGGGCAGCTCTATATTGCAAATGCAGGAGACTCTCGAGCAGTGTTAGGTAGACTTGATAAGGATAAAAATGAGATTAAAGCTGTTCAACTATCCTCTGAGCACAATGCTAGCTTAGAATCTGTCAGACAGGAGATGCGCACATTGCATCCTGATGATCCACAGATTCTAGTTATGAAGCACAAGGTTTGGCGTGTGAAGGGTCTGATTCAGGTTTCAAGATCCATTGGTGATGCCTATCTAAAGAAGGCAGAGTTTAACAAACCACCACTATTGCAAAAATTTAGACTCTCAGAACCATTTGAGAAGCCAATCCTTCTAGCTGAACCAGCAATACTAGTACAAAAACTCTATCCTCAGGATCAATTTCTTATATTTGCATCAGATGGGTTATGGGAGCACTTGAGCAATGAAACAGCAGTTGAAATTGTCCAGAGATGTCCACGTAATGGAGTAGCAAGGAAACTTATCAAAACTGCACTCTGTGAAGCTGCAAAGAAAAGAGAAATGAGATACTCAGACTTGAAAAAGATTGATAGGGGGGTGAGGAGACATTTCCATGATGATATAACGGTTATTGTTTTGTTTCTTGATTCACATCTAATCAGCCGTGCTAGTTCACATGGACCCTTCATTTCGATCAAAGGAGCTGGTGTTAATCGCATGCCATCATCGTCCTTCCCAGGTGACCTTCTTTACCTTCCGTCTTTACCTGTCCATGTTTCTGACTCTCCTTCTATCACCTCTTCTGCTAATGAGATCGAGCATAGTTCGTCAGATGTCTCTGTGGACTCACATTCAACTGCATCTCCTACTATGGCTTCGGTCCCACGTTCGGATAGTGACCTTCCCATTGCTCTTCGTAAGGACTATAGGTGA 1359 0.4209 MASATIRRIVSPCWRSSIAGEKSNRNGDSSGRVNGLLWYKDSGRHVNGEFSMAVVQANYLLEDQSQIESGSMSSIAASPQGTFVGIYDGHGGPEASRFVNDSLFKNIKKFTAENQEMSADVIHKAFLETEEEFLSFVRKQWQHKPQIASVGSCCLVGIICSGQLYIANAGDSRAVLGRLDKDKNEIKAVQLSSEHNASLESVRQEMRTLHPDDPQILVMKHKVWRVKGLIQVSRSIGDAYLKKAEFNKPPLLQKFRLSEPFEKPILLAEPAILVQKLYPQDQFLIFASDGLWEHLSNETAVEIVQRCPRNGVARKLIKTALCEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVLFLDSHLISRASSHGPFISIKGAGVNRMPSSSFPGDLLYLPSLPVHVSDSPSITSSANEIEHSSSDVSVDSHSTASPTMASVPRSDSDLPIALRKDYR 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4778g00007 452 MobiDBLite consensus disorder prediction 405 452 - -
Gabi4778g00007 452 ProSitePatterns PPM-type phosphatase domain signature. 83 91 IPR000222 GO:0043169
Gabi4778g00007 452 MobiDBLite consensus disorder prediction 405 437 - -
Gabi4778g00007 452 FunFam Phosphatase 2C family protein 38 367 - -
Gabi4778g00007 452 ProSiteProfiles PPM-type phosphatase domain profile. 68 357 IPR001932 -
Gabi4778g00007 452 PANTHER PROTEIN PHOSPHATASE 34 355 IPR015655 GO:0004722|GO:0006470
Gabi4778g00007 452 Pfam Protein phosphatase 2C 73 326 IPR001932 -
Gabi4778g00007 452 SMART PP2C_4 43 355 IPR001932 -
Gabi4778g00007 452 Gene3D - 33 367 IPR036457 -
Gabi4778g00007 452 SUPERFAMILY PP2C-like 77 358 IPR036457 -
Gabi4778g00007 452 CDD PP2Cc 62 357 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4778g00007 Gabi-Chr4778 63728 71053 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4778g00007 1 385 PP2C-type Phosphatase Gene Family AT3G12620 73.834 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4778g00007 K01102 - tcc:18586300 605.905