Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4776g00007 ATGCCAACAGTGTGGTTCAATCTGAAGAGGTCTCTACACTGCAAATCTGAGCCTTCTGATGTTCATGATCCAAAATCAAGGAAGCATTTAAGCACAATCTTGACCAAAAGAGGAGGAAGGTCAGGTTGTTCAAGGTCCATAGCAAATCTCAAAGATGTCATCCATGGAAGCAAAAGGCATATTGATAAGCCACCAAGTTGCAGTCCAAGATCCATAGGGAGCAGTGAGTTCCTCAACCCTATAACTCATGAAGTGATTTTGAGTAACTCAAGGTGTGAGCTGAAAATCACTGGATATGGAGGATTCCAAGAAGGGGTTGGCAGTGGTGGTGGTGGTAACAGTAATGGCGGTTCAACCTTTGTGGGTACTTTGAGGCCTGGGACTCCGGGCCCTGGAGGGCACCCTACAATGCACTACTTTAACCCCTCTTTTAGGACTTCATCCACTCCTCCAAGGAGATCTCCTTTCCTTTTATCAGATAAAGAAGGGTCTGGTTTTCATGGTGTTGGAATTCATTCAAGCAATAGGTTGTCTCTTGAGACAGATTCTAATGGGTCTTCAACTATGACTTGTCACAAATGTGGAGAACAATTTAGCAAATGGGAAGCTGCTGAAGCTCATCATCAGTCCAAGCATGCTGTTACTGAGCTTGTGGAAGGGGATTCATCAAGGAAAATAGTGGAGATCATATGCAGGACAAGCTGGTTAAAGTCTGAAAACCACTGTGGTCGAATTGAGAGAGTTTTGAAGGTTCACAACATGCAAAGGACTCTGGCTAGATTCGAAGAGCATAGGGAGATGGTGAAAATCAAAGCCAGCAAGCTTCAGAAGAAGCATCCTAGGTGTTTGGCTGATGGGAATGAGCTTTTGAGGTTCTATGGAACCACTGTTGTATGCTCTCTTGGTCTCAATGGCTCATCTAGTCTTTGCCTATCTGAAAAATGTTGTGTTTGTAGAATTATCAGAAATGGTTTTTCCACCAAGAAGGAGCTCAAGGGTGGCATAGGTGTATTCACAACATCAACAAGTGGTAGAGCTTTTGAGTCTATAGAAATTGTTGGTGATGATCCATCATTGAGAAAAGCATTGATAGTCTGCAGAGTAATTGCTGGAAGGGTTCATAAGCCATTGGAGAACATTCAGGAAATGGCAGCTCAAACAGGATTTGACTCATTGGCTGGGAAAGTAGGTCTTTATTCAAATATTGAGGAGCTTTATTTGCTTAATCCTAGAGCTCTTCTTCCTTGCTTTGTGGTAATTTGCAAACCATGA 1272 0.4292 MPTVWFNLKRSLHCKSEPSDVHDPKSRKHLSTILTKRGGRSGCSRSIANLKDVIHGSKRHIDKPPSCSPRSIGSSEFLNPITHEVILSNSRCELKITGYGGFQEGVGSGGGGNSNGGSTFVGTLRPGTPGPGGHPTMHYFNPSFRTSSTPPRRSPFLLSDKEGSGFHGVGIHSSNRLSLETDSNGSSTMTCHKCGEQFSKWEAAEAHHQSKHAVTELVEGDSSRKIVEIICRTSWLKSENHCGRIERVLKVHNMQRTLARFEEHREMVKIKASKLQKKHPRCLADGNELLRFYGTTVVCSLGLNGSSSLCLSEKCCVCRIIRNGFSTKKELKGGIGVFTTSTSGRAFESIEIVGDDPSLRKALIVCRVIAGRVHKPLENIQEMAAQTGFDSLAGKVGLYSNIEELYLLNPRALLPCFVVICKP 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4776g00007 423 Coils Coil 258 278 - -
Gabi4776g00007 423 SUPERFAMILY ADP-ribosylation 214 422 - -
Gabi4776g00007 423 Gene3D - 202 422 - -
Gabi4776g00007 423 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 4 421 - -
Gabi4776g00007 423 ProSitePatterns Zinc finger C2H2 type domain signature. 191 212 IPR013087 -
Gabi4776g00007 423 FunFam C2H2-like zinc finger protein 213 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4776g00007 Gabi-Chr4776 118720 120742 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4776g00007 1 423 C2H2 Transcription Factor Family AT5G54630 66.955 0.0 578
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Gabi4776g00007 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4776g00007 - - gmx:100787790 737.258